Mercurial > repos > iuc > datamash_transpose

diff datamash-transpose.xml @ 0:60e287a6d17d draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 8a7a779896ce1b9b296557a2c31bd93f5fbb5462
author iuc
date Wed, 28 Oct 2015 12:45:41 -0400
parents
children 1cb70a56fc89
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/datamash-transpose.xml	Wed Oct 28 12:45:41 2015 -0400
@@ -0,0 +1,45 @@
+<?xml version="1.0"?>
+<tool id="datamash_transpose" name="Transpose" version="1.0.6">
+    <description>rows/columns in a tabular file</description>
+    <macros>
+        <import>macros.xml</import>
+    </macros>
+    <expand macro="requirements" />
+    <expand macro="stdio" />
+    <command><![CDATA[datamash -W transpose < $in_file > $out_file]]></command>
+    <expand macro="inputs_outputs" />
+    <tests>
+        <test>
+            <param name="in_file" value="datamash_transpose_input.txt" />
+            <output file="datamash_transpose_output.txt" name="out_file" />
+        </test>
+    </tests>
+    <help>
+<![CDATA[
+@HELP_HEADER@
+
+**Syntax**
+
+This tools transposes (swaps) rows/columns in a tabular input file.
+
+-----
+
+**Example**
+
+Input file::
+
+    Genes   NOX1  DcP  HH
+    Sample  A1    A2   B3
+    Counts  514   542  490
+
+Output file::
+
+    Genes  Sample  Counts
+    NOX1   A1      514
+    DcP    A2      542
+    HH     B3      490
+
+@HELP_FOOTER@
+]]>
+    </help>
+</tool>