Mercurial > repos > iuc > datamash_transpose

diff datamash-transpose.xml @ 6:a513e3fbb4c5 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/datamash commit 2214890e6a31af0d1157373e81fc93c4626cb415
author iuc
date Thu, 09 Nov 2023 12:01:09 +0000
parents 374cb875d38a
children
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--- a/datamash-transpose.xml	Thu Mar 23 20:47:02 2023 +0000
+++ b/datamash-transpose.xml	Thu Nov 09 12:01:09 2023 +0000
@@ -2,6 +2,7 @@
     <description>rows/columns in a tabular file</description>
     <macros>
         <import>macros.xml</import>
+        <token name="@VERSION_SUFFIX@">1</token>
     </macros>
     <edam_topics>
         <edam_topic>topic_3570</edam_topic> <!-- Pure math / linear algebra -->
@@ -13,7 +14,7 @@
     <expand macro="stdio"/>
     <command><![CDATA[
         #import os
-        #set file_size_MB = os.path.getsize(str($in_file)) / (1024 * 1024)
+        #set file_size_MB = $in_file.get_size() / (1024 * 1024)
         #set size_threshold_MB = 1024
         #if $file_size_MB <= $size_threshold_MB:
             datamash transpose @FIELD_SEPARATOR@ < $in_file > $out_file