Mercurial > repos > iuc > decontaminator
diff tool-data/decontaminator.loc.sample @ 0:b856d3d95413 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/decontaminator commit 3f8e87001f3dfe7d005d0765aeaa930225c93b72
author | iuc |
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date | Mon, 09 Jan 2023 13:27:09 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/decontaminator.loc.sample Mon Jan 09 13:27:09 2023 +0000 @@ -0,0 +1,27 @@ +#This is a sample file distributed with Galaxy that enables tools +#to use a directory of decontaminator hdf5 model files. You will need +#to create these data files and then create a decontaminator.loc file +#similar to this one (store it in this directory) that points to +#the directories in which those files are stored. The decontaminator.loc +#file has this format (white space characters are TAB characters): +# +# <value> <name> <path> +# +#So, for example, if you had fungi hdf5 model files stored in +# +# /tool-data/weights/fungi/, +# +#then the decontaminator.loc entry would look like this: +# +#fungi fungi ${__HERE__}/weights/fungi +# +#and your /tool-data/weights/fungi/ directory +#would contain model_500.h5 and model_1000.h5 files. +# +#Your decontaminator.loc file should include an entry per line for +#each index set you have stored. The file in the path does actually +#exist, but it should never be directly used. Instead, the name serves +#as a prefix for the index file. For example: +# +#fungi fungi ${__HERE__}/weights/fungi +#phage phage ${__HERE__}/weights/phage