Mercurial > repos > iuc > delly_filter

diff filter.xml @ 3:d2590fe6793f draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/delly commit d76130cdcb21f0390b4e68e733d38575fd5cc6c7"
author: iuc
date: Tue, 14 Dec 2021 19:06:53 +0000
parents: 6184cfc70e28
--- a/filter.xml	Fri Jan 22 14:32:03 2021 +0000
+++ b/filter.xml	Tue Dec 14 19:06:53 2021 +0000
@@ -1,6 +1,7 @@
 <?xml version="1.0"?>
 <tool id="delly_filter" name="Delly filter" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="18.01">
     <description>somatic or germline structural variants</description>
+    <expand macro="bio_tools"/>
     <macros>
         <import>macros.xml</import>
     </macros>
@@ -231,7 +232,7 @@
             </output>
             <output name="out_vcf">
                 <assert_contents>
-                    <has_n_lines n="142"/>
+                    <has_n_lines n="143"/>
                     <has_line line="##fileformat=VCFv4.2"/>
                     <has_line line="#CHROM&#009;POS&#009;ID&#009;REF&#009;ALT&#009;QUAL&#009;FILTER&#009;INFO&#009;FORMAT&#009;NORMAL&#009;TUMOR"/>
                 </assert_contents>