Mercurial > repos > iuc > deseq2
comparison test-data/sailfish_quant_result2.tab @ 6:4939397c4706 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/deseq2 commit 3bc8d91ee546682ef8e9303bd1044bb14cf21b07
author | iuc |
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date | Wed, 09 Nov 2016 17:00:31 -0500 |
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5:d38fd393402e | 6:4939397c4706 |
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1 # sailfish (quasi-mapping-based) v0.7.6 | |
2 # [ program ] => sailfish | |
3 # [ command ] => quant | |
4 # [ index ] => { ./index_dir } | |
5 # [ mates1 ] => { ./mate1.fastq } | |
6 # [ mates2 ] => { ./mate2.fastq } | |
7 # [ libType ] => { IU } | |
8 # [ output ] => { ./ } | |
9 # [ biasCorrect ] => { } | |
10 # [ threads ] => { 1 } | |
11 # [ fldMean ] => { 200 } | |
12 # [ fldSD ] => { 80 } | |
13 # [ maxReadOcc ] => { 200 } | |
14 # [ maxFragLen ] => { 1000 } | |
15 # [ txpAggregationKey ] => { gene_id } | |
16 # [ mapping rate ] => { 100% } | |
17 # Name Length TPM NumReads | |
18 NM_001168316 2283 1239.5 159.361 | |
19 NM_174914 2385 11125 1505.04 | |
20 NR_031764 1853 1025.5 100.595 | |
21 NM_004503 1681 3619.8 320.806 | |
22 NM_006897 1541 8224.3 660 | |
23 NM_014212 2037 485.08 60 | |
24 NM_014620 2300 4513.7 580.838 | |
25 NM_017409 1959 433.19 45 | |
26 NM_017410 2396 3219.5 40 | |
27 NM_018953 1612 2616.3 220 | |
28 NM_022658 2288 37883 4880 | |
29 NM_153633 1666 4057.4 360.074 | |
30 NM_153693 2072 643.57 70.2815 | |
31 NM_173860 849 2521 960 | |
32 NR_003084 1640 1000 10 |