Mercurial > repos > iuc > deseq2

comparison deseq2_macros.xml @ 27:d027d1f4984e draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/deseq2 commit c8e7020d39d581d7374a13cf94c64998a6481e05"
author iuc
date Mon, 28 Jun 2021 05:14:25 +0000
parents e5c8afac22a7
children 7ff33c2d525b
comparison
equal deleted inserted replaced
26:6a3a025714d3 27:d027d1f4984e
16 </param> 16 </param>
17 <yield/> 17 <yield/>
18 </repeat> 18 </repeat>
19 </repeat> 19 </repeat>
20 </xml> 20 </xml>
21 <xml name="requirements">
22 <requirements>
23 <requirement type="package" version="1.22.1">bioconductor-deseq2</requirement>
24 <!-- Optional dependency of tximport, needed to import kallisto results https://github.com/galaxyproject/usegalaxy-playbook/issues/161 -->
25 <requirement type="package" version="2.26.2">bioconductor-rhdf5</requirement>
26 <requirement type="package" version="1.10.0">bioconductor-tximport</requirement>
27 <requirement type="package" version="1.34.1">bioconductor-genomicfeatures</requirement>
28 <requirement type="package" version="1.20.2">r-getopt</requirement>
29 <requirement type="package" version="0.8.0">r-ggrepel</requirement>
30 <requirement type="package" version="3.0.1">r-gplots</requirement>
31 <requirement type="package" version="1.0.10">r-pheatmap</requirement>
32 <requirement type="package" version="0.2.20">r-rjson</requirement>
33 </requirements>
34 </xml>
35 <token name="@TOOL_VERSION@">2.11.40.6</token>
36 <token name="@SUFFIX_VERSION@">2</token>
37 <xml name="edam_ontology">
38 <edam_topics>
39 <edam_topic>topic_3308</edam_topic>
40 </edam_topics>
41 <edam_operations>
42 <edam_operation>operation_3800</edam_operation>
43 </edam_operations>
44 </xml>
45 <xml name="citations">
46 <citations>
47 <citation type="doi">10.1186/s13059-014-0550-8</citation>
48 </citations>
49 </xml>
50 <xml name="xrefs">
51 <xrefs>
52 <xref type='bio.tools'>DESeq2</xref>
53 </xrefs>
54 </xml>
21 </macros> 55 </macros>