diff test-data/sailfish/sailfish_quant.sf2.tab @ 11:25204a860b79 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/deseq2 commit 0a56599c36b4968095ec5a3cb589f94fb139466c
author iuc
date Sun, 28 Jan 2018 04:04:12 -0500
parents
children bd06df00180a
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/sailfish/sailfish_quant.sf2.tab	Sun Jan 28 04:04:12 2018 -0500
@@ -0,0 +1,48010 @@
+Name	Length	EffectiveLength	TPM	NumReads
+NR_001526	164	20.0161	0	0
+NR_001526_1	164	20.0161	0	0
+NR_001526_2	164	20.0161	0	0
+NM_130786	1764	1955.74	5.67015	316.138
+NR_015380	2129	2138.24	2.31569	141.158
+NM_001198818	9360	7699.81	2.14822e-07	4.7155e-05
+NM_001198819	9527	7866.56	0	0
+NM_001198820	9410	7758.28	0	0
+NM_014576	9267	7620.82	0.0429759	9.33676
+NM_138932	9291	7637.36	0.00314037	0.683744
+NM_138933	9362	7714.26	2.75415e-08	6.05692e-06
+NM_000014	4653	4336.48	0.0161779	2
+NR_026971	2187	1834.47	0.0191214	1
+NM_001282424	3789	3545.23	0.0101848	1.02936
+NM_144670	5192	4901.2	0	0
+NR_040112	1201	1008.64	0	0
+NM_001080438	1023	830.643	0	0
+NM_017436	2091	2353.49	10.2543	688.003
+NM_016161	1771	1578.64	0	0
+NR_037584	631	439.341	0	0
+NM_001173466	1737	1730.43	0.281739	13.8986
+NM_015665	1836	1834.5	22.9491	1200.2
+NM_023928	3321	3439.12	10.0419	984.538
+NR_024035	2171	1986.43	0.088293	5
+NM_001086	1606	1413.64	0	0
+NM_207365	1498	1305.64	0	0
+NR_110202	772	580.341	0	0
+NR_110203	712	520.341	0	0
+NM_001103170	4049	3705.33	0	0
+NR_111984	3832	3502.94	0.0300413	3
+NM_001013630	1574	1381.64	0	0
+NR_026915	1289	1096.64	0	0
+NM_001286682	2119	1688.38	1.73875e-07	8.36907e-06
+NM_001286683	2192	1784.39	0	0
+NM_016228	2325	1947.84	0	0
+NM_182662	2107	1671.19	0.0213552	1.01741
+NM_153698	1224	956.703	6.74638	184
+NM_001271885	3083	2590.38	2.64355	195.219
+NM_001271886	3344	2904.86	0.376302	31.1625
+NM_024666	3199	2716.39	7.69552	595.937
+NM_014911	21265	19063.3	2.1278	1156.38
+NM_024684	503	311.429	18.0663	160.398
+NM_001087	1792	1783.4	36.8386	1872.93
+NM_001088	1025	999.814	0.0828078	2.36026
+NM_001166579	1912	1915.55	0.288146	15.7354
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+NM_001271874	2486	2461.63	10.5656	741.463
+NM_015511	2765	2783.32	0.185533	14.7216
+NM_001025357	1784	1590.76	0.270761	12.2789
+NM_001605	3344	3332.64	65.0847	6183.54
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+NM_001286671	3182	2565.29	0.0518273	3.79023
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+NM_015423	2861	2259.94	13.2865	856.007
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+NM_012138	2140	2048.4	50.4221	2944.47
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+NM_212533	8146	9706.98	0.185307	51.2796
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+NM_018672	9249	7225.01	1.39594	287.525
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+NM_080284	5296	4371.18	4.49386	560
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+NM_004996	6561	6962.95	8.86742	1760.19
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+NM_033226	5168	4975.64	0	0
+NR_003087	2822	2244.19	0.206228	13.194
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+NM_003786	5165	5477.34	0.0192124	3
+NM_001105515	3063	2670.46	0.344662	26.2391
+NM_005845	5842	5079.76	5.35551	775.557
+NM_001023587	1972	1752.75	0.410485	20.511
+NM_005688	5841	5766.01	0.404486	66.489
+NR_046570	467	275.943	0	0
+NM_001079528	717	525.341	0	0
+NM_001171	5116	5645.39	0.012427	2
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+NM_005691	4670	4477.64	0	0
+NM_020297	8322	6841.17	4.00206	780.52
+NM_000033	3664	4317.94	1.15356	142
+NM_005164	5341	4201.24	0.667947	80
+NM_001122674	966	705.032	0.335218	6.73761
+NM_002858	3615	2867.04	7.28572	595.493
+NM_005050	3157	3059.94	4.40509	384.271
+NR_003256	3029	2937.94	1.7208	144.126
+NM_001040876	4190	3354.67	1.32244	126.472
+NM_002940	4193	3357.47	32.267	3088.45
+NM_001025091	3462	3472.3	30.4179	3011.04
+NM_001090_1	3348	3356.25	0.438531	41.9589
+NM_005692	2393	2261.83	5.21307	336.143
+NM_007189	4695	4555.42	9.05591	1176.06
+NM_018358	2572	2664.43	12.0883	918.202
+NM_004915	2993	3063.34	1.68828	147.438
+NM_016818	2957	3029.06	0.381231	32.9205
+NM_207174	2958	3007.18	0	0
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+NM_207629	2921	2957.94	1.06399	89.721
+NM_001257386	4275	3479.09	0.0403297	4
+NM_004827	4430	3714.51	0	0
+NM_001142505	3609	3800.73	0.00922918	1
+NM_022169	3833	4028.43	0	0
+NM_022436	2739	2569.75	0.0136502	1
+NM_022437	2664	2471.64	0	0
+NM_032604	1444	1366.14	0.0514774	2.00485
+NM_001272069	2805	2220.86	0.898772	56.9036
+NM_018394	2753	2178.15	9.08774	564.305
+NR_073570	2569	2007.41	0.92942	53.1886
+NR_073571	2457	1904.9	1.61315	87.6026
+NM_001145364	1296	1259.56	1.31877	47.3538
+NM_148912	1467	1449.21	3.87541	160.111
+NM_148913	1446	1416.09	0	0
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+NR_026912	1638	1633.95	1.07992	50.3037
+NM_001042472	2122	2233.85	16.102	1025.42
+NM_015600	1723	1716.56	0.393279	19.2455
+NM_001206673	1707	1403.3	0	0
+NM_181814	1476	1192.67	0.176467	6
+NM_032859	5301	4012.34	4.26709	488.09
+NM_015407	1107	1057.21	5.18693	156.33
+NR_037192	1878	1909.31	0.236601	12.8785
+NM_001146314	2242	2320.47	17.374	1149.33
+NM_001254753	2003	2029.87	8.2963	480.091
+NM_032750	2436	2518.61	4.29055	308.066
+NM_198147	3353	3509.8	1.67164	167.261
+NM_001177515	2144	2176.3	0.21661	13.4391
+NM_021160	2017	2025.97	6.04045	348.877
+NR_033488_2	2268	2292.06	0	0
+NR_033489_1	1893	1902.13	0.787174	42.6855
+NM_080622	1776	2052.67	1.26061	73.7682
+NM_001130111	1562	1811.63	23.9676	1237.84
+NM_031213	1715	2005.76	0.0779069	4.45477
+NM_001025780	3103	2647.79	8.26235	623.673
+NM_016014	1611	1500.02	0.189477	8.10257
+NM_021214	2358	2214.06	1.56847	99
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+NM_138340	2064	1649.97	12.5406	589.881
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+NM_016006	5352	4279.63	2.04184	249.113
+NM_020676	2391	2284.68	3.97499	258.9
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+NM_001282927	6113	5169.53	2.33015	343.404
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+NM_016428	2109	2304.55	29.0182	1906.46
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+NM_005157	5386	5998.94	4.85265	829.896
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+NM_001136001	2139	1946.64	0	0
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+NM_001168238	11854	10874	0	0
+NM_001168239	11567	10444.3	0.668474	199.037
+NM_005158	11939	10825.9	0.367786	113.508
+NM_007314	12226	11255.6	0	0
+NM_001003407	7608	7076.96	0.00124339	0.250856
+NM_001003408	7692	7145.73	0	0
+NM_002313	7585	7051.75	0.0796423	16.0107
+NM_006720	6838	6242.81	3.62865	645.795
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+NM_032432	3388	3676.3	0.0572493	5.99999
+NM_014945	4335	4330.16	0.121533	15.0026
+NM_020469	1579	1386.64	0	0
+NM_001092	5063	5442.02	3.06213	475.066
+NM_001159746	5604	6091.61	0.733545	127.388
+NM_001256847	3595	3908.89	8.71771	971.462
+NM_001282149	4775	5156.1	1.27361	187.21
+NM_021962	5389	5897.1	1.57451	264.699
+NM_139166	2753	2254.59	0.0691157	4.44237
+NM_021243	845	560.518	99.2262	1585.57
+NM_013375	2261	2087.88	21.9745	1307.96
+NM_032548	1986	2128.06	0	0
+NM_172027	1975	2125.23	3.84683	233.066
+NR_033429	1940	2083.97	0.907824	53.934
+NM_145804	4902	5557.38	1.92515	305.003
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+NM_001130410	1539	1527.06	0.936494	40.769
+NM_001607	1818	1827.63	16.1991	844.016
+NR_024024	1943	1977.08	2.66514	150.215
+NM_006111	1933	1706.04	43.3129	2106.57
+NM_198834	9988	9587.76	3.6576e-06	0.000999731
+NM_198836	9555	9094.67	1.86628	483.875
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+NM_000016	2620	2187.09	45.1069	2812.41
+NM_001127328	2632	2195.37	0.762221	47.7044
+NM_001286042	2532	2106.11	2.52199	151.424
+NM_001286043	2719	2270.43	0.128555	8.32083
+NM_001286044	2350	1949.18	0.103519	5.75233
+NM_000017	1916	2100	11.6329	696.432
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+NM_001082486	2065	2263.51	11.9439	770.726
+NM_001082487	2017	2129.15	0	0
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+NM_015831	2956	3473.99	2.04159	202.193
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+NM_014977	4935	5178.13	0.000462282	0.0682417
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+NM_002036	2006	1936.68	0.130732	7.21789
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+NR_033848	3147	2666.27	0.0968988	7.36534
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+NR_033853	2603	2381.99	0.19144	13
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