view test-data/dexseq.gtf @ 0:4ca0e679f21e draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dexseq commit 876fc32b23d3b9c378ddbfbbba27d37d22576c85
author iuc
date Thu, 08 Oct 2015 16:52:01 -0400
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2L	dexseq_prepare_annotation.py	aggregate_gene	378112	387439	.	+	.	gene_id "FBgn0000061"
2L	dexseq_prepare_annotation.py	exonic_part	378112	378481	.	+	.	transcripts "FBtr0078053"; exonic_part_number "001"; gene_id "FBgn0000061"
2L	dexseq_prepare_annotation.py	exonic_part	384511	384894	.	+	.	transcripts "FBtr0078053"; exonic_part_number "002"; gene_id "FBgn0000061"
2L	dexseq_prepare_annotation.py	exonic_part	385701	385746	.	+	.	transcripts "FBtr0078053"; exonic_part_number "003"; gene_id "FBgn0000061"
2L	dexseq_prepare_annotation.py	exonic_part	386308	386576	.	+	.	transcripts "FBtr0078053"; exonic_part_number "004"; gene_id "FBgn0000061"
2L	dexseq_prepare_annotation.py	exonic_part	386703	387439	.	+	.	transcripts "FBtr0078053"; exonic_part_number "005"; gene_id "FBgn0000061"
2L	dexseq_prepare_annotation.py	aggregate_gene	2156484	2178749	.	-	.	gene_id "FBgn0000097"
2L	dexseq_prepare_annotation.py	exonic_part	2156484	2156791	.	-	.	transcripts "FBtr0330658+FBtr0077850+FBtr0077851"; exonic_part_number "001"; gene_id "FBgn0000097"
2L	dexseq_prepare_annotation.py	exonic_part	2156792	2157426	.	-	.	transcripts "FBtr0330658+FBtr0330659+FBtr0077850+FBtr0077851"; exonic_part_number "002"; gene_id "FBgn0000097"
2L	dexseq_prepare_annotation.py	exonic_part	2157427	2158405	.	-	.	transcripts "FBtr0330658+FBtr0330660+FBtr0077850+FBtr0077851+FBtr0330659"; exonic_part_number "003"; gene_id "FBgn0000097"
2L	dexseq_prepare_annotation.py	exonic_part	2158468	2159245	.	-	.	transcripts "FBtr0330658+FBtr0330660+FBtr0077850+FBtr0077851+FBtr0330659"; exonic_part_number "004"; gene_id "FBgn0000097"
2L	dexseq_prepare_annotation.py	exonic_part	2159312	2160582	.	-	.	transcripts "FBtr0330658+FBtr0330660+FBtr0077850+FBtr0077851+FBtr0330659"; exonic_part_number "005"; gene_id "FBgn0000097"
2L	dexseq_prepare_annotation.py	exonic_part	2161010	2161232	.	-	.	transcripts "FBtr0330659"; exonic_part_number "006"; gene_id "FBgn0000097"
2L	dexseq_prepare_annotation.py	exonic_part	2161233	2161522	.	-	.	transcripts "FBtr0330659+FBtr0077851"; exonic_part_number "007"; gene_id "FBgn0000097"
2L	dexseq_prepare_annotation.py	exonic_part	2171142	2171198	.	-	.	transcripts "FBtr0330658"; exonic_part_number "008"; gene_id "FBgn0000097"
2L	dexseq_prepare_annotation.py	exonic_part	2177847	2178749	.	-	.	transcripts "FBtr0330658+FBtr0330660+FBtr0077850"; exonic_part_number "009"; gene_id "FBgn0000097"
2L	dexseq_prepare_annotation.py	aggregate_gene	6041178	6045970	.	-	.	gene_id "FBgn0000052"
2L	dexseq_prepare_annotation.py	exonic_part	6041178	6042011	.	-	.	transcripts "FBtr0079219+FBtr0079221+FBtr0079220"; exonic_part_number "001"; gene_id "FBgn0000052"
2L	dexseq_prepare_annotation.py	exonic_part	6042075	6044351	.	-	.	transcripts "FBtr0079219+FBtr0079221+FBtr0079220"; exonic_part_number "002"; gene_id "FBgn0000052"
2L	dexseq_prepare_annotation.py	exonic_part	6044428	6045526	.	-	.	transcripts "FBtr0079219+FBtr0079221+FBtr0079220"; exonic_part_number "003"; gene_id "FBgn0000052"
2L	dexseq_prepare_annotation.py	exonic_part	6045527	6045593	.	-	.	transcripts "FBtr0079221"; exonic_part_number "004"; gene_id "FBgn0000052"
2L	dexseq_prepare_annotation.py	exonic_part	6045894	6045920	.	-	.	transcripts "FBtr0079219"; exonic_part_number "005"; gene_id "FBgn0000052"
2L	dexseq_prepare_annotation.py	exonic_part	6045921	6045970	.	-	.	transcripts "FBtr0079219+FBtr0079220"; exonic_part_number "006"; gene_id "FBgn0000052"
2L	dexseq_prepare_annotation.py	aggregate_gene	7014861	7023940	.	-	.	gene_id "FBgn0000053"
2L	dexseq_prepare_annotation.py	exonic_part	7014861	7016374	.	-	.	transcripts "FBtr0079431"; exonic_part_number "001"; gene_id "FBgn0000053"
2L	dexseq_prepare_annotation.py	exonic_part	7016437	7017486	.	-	.	transcripts "FBtr0079431"; exonic_part_number "002"; gene_id "FBgn0000053"
2L	dexseq_prepare_annotation.py	exonic_part	7017545	7017966	.	-	.	transcripts "FBtr0079431"; exonic_part_number "003"; gene_id "FBgn0000053"
2L	dexseq_prepare_annotation.py	exonic_part	7018085	7018148	.	-	.	transcripts "FBtr0100353"; exonic_part_number "004"; gene_id "FBgn0000053"
2L	dexseq_prepare_annotation.py	exonic_part	7018149	7018374	.	-	.	transcripts "FBtr0079431+FBtr0100353"; exonic_part_number "005"; gene_id "FBgn0000053"
2L	dexseq_prepare_annotation.py	exonic_part	7018431	7019080	.	-	.	transcripts "FBtr0079431+FBtr0100353"; exonic_part_number "006"; gene_id "FBgn0000053"
2L	dexseq_prepare_annotation.py	exonic_part	7019135	7019382	.	-	.	transcripts "FBtr0079431+FBtr0100353"; exonic_part_number "007"; gene_id "FBgn0000053"
2L	dexseq_prepare_annotation.py	exonic_part	7023529	7023940	.	-	.	transcripts "FBtr0079431+FBtr0100353"; exonic_part_number "008"; gene_id "FBgn0000053"
2L	dexseq_prepare_annotation.py	aggregate_gene	10973443	10975273	.	-	.	gene_id "FBgn0000018"
2L	dexseq_prepare_annotation.py	exonic_part	10973443	10974210	.	-	.	transcripts "FBtr0080168"; exonic_part_number "001"; gene_id "FBgn0000018"
2L	dexseq_prepare_annotation.py	exonic_part	10974268	10975273	.	-	.	transcripts "FBtr0080168"; exonic_part_number "002"; gene_id "FBgn0000018"
2L	dexseq_prepare_annotation.py	aggregate_gene	12175004	12313438	.	+	.	gene_id "FBgn0000114"
2L	dexseq_prepare_annotation.py	exonic_part	12175004	12175420	.	+	.	transcripts "FBtr0331998"; exonic_part_number "001"; gene_id "FBgn0000114"
2L	dexseq_prepare_annotation.py	exonic_part	12201326	12201771	.	+	.	transcripts "FBtr0331648"; exonic_part_number "002"; gene_id "FBgn0000114"
2L	dexseq_prepare_annotation.py	exonic_part	12205843	12206130	.	+	.	transcripts "FBtr0331646+FBtr0080344"; exonic_part_number "003"; gene_id "FBgn0000114"
2L	dexseq_prepare_annotation.py	exonic_part	12222197	12222337	.	+	.	transcripts "FBtr0331647+FBtr0331645"; exonic_part_number "004"; gene_id "FBgn0000114"
2L	dexseq_prepare_annotation.py	exonic_part	12240868	12241780	.	+	.	transcripts "FBtr0080344+FBtr0331645"; exonic_part_number "005"; gene_id "FBgn0000114"
2L	dexseq_prepare_annotation.py	exonic_part	12270932	12271347	.	+	.	transcripts "FBtr0331644+FBtr0080345+FBtr0300567"; exonic_part_number "006"; gene_id "FBgn0000114"
2L	dexseq_prepare_annotation.py	exonic_part	12271591	12272084	.	+	.	transcripts "FBtr0300567+FBtr0331648+FBtr0331646+FBtr0331647+FBtr0331644+FBtr0331645+FBtr0080344+FBtr0080345+FBtr0331998"; exonic_part_number "007"; gene_id "FBgn0000114"
2L	dexseq_prepare_annotation.py	exonic_part	12278837	12278919	.	+	.	transcripts "FBtr0300567+FBtr0331648+FBtr0331646+FBtr0331647+FBtr0331644+FBtr0331645+FBtr0080344+FBtr0080345+FBtr0331998"; exonic_part_number "008"; gene_id "FBgn0000114"
2L	dexseq_prepare_annotation.py	exonic_part	12282514	12282562	.	+	.	transcripts "FBtr0300567+FBtr0331648+FBtr0331646+FBtr0331647+FBtr0331644+FBtr0331645+FBtr0080344+FBtr0080345+FBtr0331998"; exonic_part_number "009"; gene_id "FBgn0000114"
2L	dexseq_prepare_annotation.py	exonic_part	12287223	12287808	.	+	.	transcripts "FBtr0080347"; exonic_part_number "010"; gene_id "FBgn0000114"
2L	dexseq_prepare_annotation.py	exonic_part	12288905	12289344	.	+	.	transcripts "FBtr0080347"; exonic_part_number "011"; gene_id "FBgn0000114"
2L	dexseq_prepare_annotation.py	exonic_part	12298568	12298749	.	+	.	transcripts "FBtr0300567+FBtr0331648+FBtr0331646+FBtr0331647+FBtr0331644+FBtr0331645+FBtr0080347+FBtr0080344+FBtr0080345+FBtr0331998"; exonic_part_number "012"; gene_id "FBgn0000114"
2L	dexseq_prepare_annotation.py	exonic_part	12298814	12299111	.	+	.	transcripts "FBtr0300567+FBtr0331648+FBtr0331646+FBtr0331647+FBtr0331644+FBtr0331645+FBtr0080347+FBtr0080344+FBtr0080345+FBtr0331998"; exonic_part_number "013"; gene_id "FBgn0000114"
2L	dexseq_prepare_annotation.py	exonic_part	12299188	12299394	.	+	.	transcripts "FBtr0300567+FBtr0331648+FBtr0331646+FBtr0331647+FBtr0331644+FBtr0331645+FBtr0080347+FBtr0080344+FBtr0080345+FBtr0331998"; exonic_part_number "014"; gene_id "FBgn0000114"
2L	dexseq_prepare_annotation.py	exonic_part	12300361	12300396	.	+	.	transcripts "FBtr0331644"; exonic_part_number "015"; gene_id "FBgn0000114"
2L	dexseq_prepare_annotation.py	exonic_part	12300610	12300621	.	+	.	transcripts "FBtr0331644"; exonic_part_number "016"; gene_id "FBgn0000114"
2L	dexseq_prepare_annotation.py	exonic_part	12304446	12304595	.	+	.	transcripts "FBtr0300567+FBtr0331648+FBtr0331646+FBtr0331647+FBtr0331644+FBtr0331645+FBtr0080347+FBtr0080344+FBtr0080345+FBtr0331998"; exonic_part_number "017"; gene_id "FBgn0000114"
2L	dexseq_prepare_annotation.py	exonic_part	12310682	12311093	.	+	.	transcripts "FBtr0300567+FBtr0331648+FBtr0331646+FBtr0331647+FBtr0331644+FBtr0331645+FBtr0080347+FBtr0080344+FBtr0080345+FBtr0331998"; exonic_part_number "018"; gene_id "FBgn0000114"
2L	dexseq_prepare_annotation.py	exonic_part	12311094	12311104	.	+	.	transcripts "FBtr0300567+FBtr0331648+FBtr0331646+FBtr0331645+FBtr0080347+FBtr0331998"; exonic_part_number "019"; gene_id "FBgn0000114"
2L	dexseq_prepare_annotation.py	exonic_part	12311105	12311203	.	+	.	transcripts "FBtr0331646+FBtr0080347+FBtr0331998+FBtr0331645+FBtr0331648"; exonic_part_number "020"; gene_id "FBgn0000114"
2L	dexseq_prepare_annotation.py	exonic_part	12311204	12312311	.	+	.	transcripts "FBtr0331646+FBtr0331998+FBtr0331645"; exonic_part_number "021"; gene_id "FBgn0000114"
2L	dexseq_prepare_annotation.py	exonic_part	12312376	12312465	.	+	.	transcripts "FBtr0331647+FBtr0080344+FBtr0080345+FBtr0331644"; exonic_part_number "022"; gene_id "FBgn0000114"
2L	dexseq_prepare_annotation.py	exonic_part	12312526	12312795	.	+	.	transcripts "FBtr0331647+FBtr0080344+FBtr0080345+FBtr0331644"; exonic_part_number "023"; gene_id "FBgn0000114"
2L	dexseq_prepare_annotation.py	exonic_part	12312796	12313438	.	+	.	transcripts "FBtr0331647+FBtr0331644"; exonic_part_number "024"; gene_id "FBgn0000114"
2L	dexseq_prepare_annotation.py	aggregate_gene	18078269	18081187	.	+	.	gene_id "FBgn0000120"
2L	dexseq_prepare_annotation.py	exonic_part	18078269	18078496	.	+	.	transcripts "FBtr0307350+FBtr0081030"; exonic_part_number "001"; gene_id "FBgn0000120"
2L	dexseq_prepare_annotation.py	exonic_part	18078916	18079723	.	+	.	transcripts "FBtr0307350+FBtr0081030"; exonic_part_number "002"; gene_id "FBgn0000120"
2L	dexseq_prepare_annotation.py	exonic_part	18079957	18080086	.	+	.	transcripts "FBtr0307350+FBtr0081030"; exonic_part_number "003"; gene_id "FBgn0000120"
2L	dexseq_prepare_annotation.py	exonic_part	18080147	18080415	.	+	.	transcripts "FBtr0307350+FBtr0081030"; exonic_part_number "004"; gene_id "FBgn0000120"
2L	dexseq_prepare_annotation.py	exonic_part	18080416	18081187	.	+	.	transcripts "FBtr0307350"; exonic_part_number "005"; gene_id "FBgn0000120"
2L	dexseq_prepare_annotation.py	aggregate_gene	19110159	19114110	.	+	.	gene_id "FBgn0000075"
2L	dexseq_prepare_annotation.py	exonic_part	19110159	19110350	.	+	.	transcripts "FBtr0081153"; exonic_part_number "001"; gene_id "FBgn0000075"
2L	dexseq_prepare_annotation.py	exonic_part	19110412	19110646	.	+	.	transcripts "FBtr0081153"; exonic_part_number "002"; gene_id "FBgn0000075"
2L	dexseq_prepare_annotation.py	exonic_part	19111844	19112315	.	+	.	transcripts "FBtr0081154"; exonic_part_number "003"; gene_id "FBgn0000075"
2L	dexseq_prepare_annotation.py	exonic_part	19112794	19114110	.	+	.	transcripts "FBtr0081153+FBtr0081154"; exonic_part_number "004"; gene_id "FBgn0000075"
2R	dexseq_prepare_annotation.py	aggregate_gene	1593707	1614335	.	-	.	gene_id "FBgn0000099"
2R	dexseq_prepare_annotation.py	exonic_part	1593707	1594728	.	-	.	transcripts "FBtr0300505+FBtr0086058+FBtr0086059"; exonic_part_number "001"; gene_id "FBgn0000099"
2R	dexseq_prepare_annotation.py	exonic_part	1594729	1595611	.	-	.	transcripts "FBtr0300505+FBtr0086058+FBtr0086059+FBtr0300504"; exonic_part_number "002"; gene_id "FBgn0000099"
2R	dexseq_prepare_annotation.py	exonic_part	1595688	1595884	.	-	.	transcripts "FBtr0300505+FBtr0086058+FBtr0086059+FBtr0300504"; exonic_part_number "003"; gene_id "FBgn0000099"
2R	dexseq_prepare_annotation.py	exonic_part	1596116	1596372	.	-	.	transcripts "FBtr0300505+FBtr0086058+FBtr0086059+FBtr0300504"; exonic_part_number "004"; gene_id "FBgn0000099"
2R	dexseq_prepare_annotation.py	exonic_part	1596431	1596604	.	-	.	transcripts "FBtr0300505+FBtr0086058+FBtr0086059+FBtr0300504"; exonic_part_number "005"; gene_id "FBgn0000099"
2R	dexseq_prepare_annotation.py	exonic_part	1596664	1596797	.	-	.	transcripts "FBtr0086059"; exonic_part_number "006"; gene_id "FBgn0000099"
2R	dexseq_prepare_annotation.py	exonic_part	1604154	1604293	.	-	.	transcripts "FBtr0300505+FBtr0086058+FBtr0300504"; exonic_part_number "007"; gene_id "FBgn0000099"
2R	dexseq_prepare_annotation.py	exonic_part	1604294	1604554	.	-	.	transcripts "FBtr0300505"; exonic_part_number "008"; gene_id "FBgn0000099"
2R	dexseq_prepare_annotation.py	exonic_part	1604787	1605003	.	-	.	transcripts "FBtr0086058+FBtr0300504"; exonic_part_number "009"; gene_id "FBgn0000099"
2R	dexseq_prepare_annotation.py	exonic_part	1605060	1605268	.	-	.	transcripts "FBtr0086058+FBtr0300504"; exonic_part_number "010"; gene_id "FBgn0000099"
2R	dexseq_prepare_annotation.py	exonic_part	1605269	1605271	.	-	.	transcripts "FBtr0086058"; exonic_part_number "011"; gene_id "FBgn0000099"
2R	dexseq_prepare_annotation.py	exonic_part	1613326	1614335	.	-	.	transcripts "FBtr0086058+FBtr0300504"; exonic_part_number "012"; gene_id "FBgn0000099"
2R	dexseq_prepare_annotation.py	aggregate_gene	1901415	1903190	.	-	.	gene_id "FBgn0000043"
2R	dexseq_prepare_annotation.py	exonic_part	1901415	1902927	.	-	.	transcripts "FBtr0086029"; exonic_part_number "001"; gene_id "FBgn0000043"
2R	dexseq_prepare_annotation.py	exonic_part	1903082	1903190	.	-	.	transcripts "FBtr0086029"; exonic_part_number "002"; gene_id "FBgn0000043"
2R	dexseq_prepare_annotation.py	aggregate_gene	2549775	2555590	.	+	.	gene_id "FBgn0000054"
2R	dexseq_prepare_annotation.py	exonic_part	2549775	2549941	.	+	.	transcripts "FBtr0330252+FBtr0086111+FBtr0086113+FBtr0086112"; exonic_part_number "001"; gene_id "FBgn0000054"
2R	dexseq_prepare_annotation.py	exonic_part	2549942	2549953	.	+	.	transcripts "FBtr0086113+FBtr0086112"; exonic_part_number "002"; gene_id "FBgn0000054"
2R	dexseq_prepare_annotation.py	exonic_part	2549954	2550073	.	+	.	transcripts "FBtr0086112"; exonic_part_number "003"; gene_id "FBgn0000054"
2R	dexseq_prepare_annotation.py	exonic_part	2550074	2550262	.	+	.	transcripts "FBtr0330252+FBtr0086111+FBtr0086113+FBtr0086112"; exonic_part_number "004"; gene_id "FBgn0000054"
2R	dexseq_prepare_annotation.py	exonic_part	2550999	2551392	.	+	.	transcripts "FBtr0330251"; exonic_part_number "005"; gene_id "FBgn0000054"
2R	dexseq_prepare_annotation.py	exonic_part	2554225	2554518	.	+	.	transcripts "FBtr0330252+FBtr0330251+FBtr0086111+FBtr0086113+FBtr0086112"; exonic_part_number "006"; gene_id "FBgn0000054"
2R	dexseq_prepare_annotation.py	exonic_part	2554578	2555589	.	+	.	transcripts "FBtr0330252+FBtr0330251+FBtr0086111+FBtr0086113+FBtr0086112"; exonic_part_number "007"; gene_id "FBgn0000054"
2R	dexseq_prepare_annotation.py	exonic_part	2555590	2555590	.	+	.	transcripts "FBtr0330251+FBtr0086111+FBtr0086113+FBtr0086112"; exonic_part_number "008"; gene_id "FBgn0000054"
2R	dexseq_prepare_annotation.py	aggregate_gene	9341159	9370723	.	-	.	gene_id "FBgn0000119"
2R	dexseq_prepare_annotation.py	exonic_part	9341159	9342741	.	-	.	transcripts "FBtr0087702"; exonic_part_number "001"; gene_id "FBgn0000119"
2R	dexseq_prepare_annotation.py	exonic_part	9342801	9343425	.	-	.	transcripts "FBtr0087702"; exonic_part_number "002"; gene_id "FBgn0000119"
2R	dexseq_prepare_annotation.py	exonic_part	9343488	9343757	.	-	.	transcripts "FBtr0087702"; exonic_part_number "003"; gene_id "FBgn0000119"
2R	dexseq_prepare_annotation.py	exonic_part	9343821	9343978	.	-	.	transcripts "FBtr0087702"; exonic_part_number "004"; gene_id "FBgn0000119"
2R	dexseq_prepare_annotation.py	exonic_part	9344041	9347030	.	-	.	transcripts "FBtr0087702"; exonic_part_number "005"; gene_id "FBgn0000119"
2R	dexseq_prepare_annotation.py	exonic_part	9369281	9369589	.	-	.	transcripts "FBtr0087702"; exonic_part_number "006"; gene_id "FBgn0000119"
2R	dexseq_prepare_annotation.py	exonic_part	9370660	9370723	.	-	.	transcripts "FBtr0087702"; exonic_part_number "007"; gene_id "FBgn0000119"
2R	dexseq_prepare_annotation.py	aggregate_gene	13006211	13007808	.	-	.	gene_id "FBgn0000079"
2R	dexseq_prepare_annotation.py	exonic_part	13006211	13007808	.	-	.	transcripts "FBtr0087004"; exonic_part_number "001"; gene_id "FBgn0000079"
2R	dexseq_prepare_annotation.py	aggregate_gene	13012267	13013887	.	+	.	gene_id "FBgn0000078"
2R	dexseq_prepare_annotation.py	exonic_part	13012267	13013887	.	+	.	transcripts "FBtr0086983"; exonic_part_number "001"; gene_id "FBgn0000078"
2R	dexseq_prepare_annotation.py	aggregate_gene	14039209	14041565	.	+	.	gene_id "FBgn0000057"
2R	dexseq_prepare_annotation.py	exonic_part	14039209	14040146	.	+	.	transcripts "FBtr0086744"; exonic_part_number "001"; gene_id "FBgn0000057"
2R	dexseq_prepare_annotation.py	exonic_part	14040213	14041565	.	+	.	transcripts "FBtr0086744"; exonic_part_number "002"; gene_id "FBgn0000057"
2R	dexseq_prepare_annotation.py	aggregate_gene	18024494	18060346	.	+	.	gene_id "FBgn0000008"
2R	dexseq_prepare_annotation.py	exonic_part	18024494	18024495	.	+	.	transcripts "FBtr0100521"; exonic_part_number "001"; gene_id "FBgn0000008"
2R	dexseq_prepare_annotation.py	exonic_part	18024496	18024531	.	+	.	transcripts "FBtr0071763+FBtr0100521"; exonic_part_number "002"; gene_id "FBgn0000008"
2R	dexseq_prepare_annotation.py	exonic_part	18024532	18024713	.	+	.	transcripts "FBtr0071763"; exonic_part_number "003"; gene_id "FBgn0000008"
2R	dexseq_prepare_annotation.py	exonic_part	18024938	18025504	.	+	.	transcripts "FBtr0071764"; exonic_part_number "004"; gene_id "FBgn0000008"
2R	dexseq_prepare_annotation.py	exonic_part	18025505	18025756	.	+	.	transcripts "FBtr0071764+FBtr0071763+FBtr0100521"; exonic_part_number "005"; gene_id "FBgn0000008"
2R	dexseq_prepare_annotation.py	exonic_part	18039159	18039200	.	+	.	transcripts "FBtr0071764+FBtr0071763+FBtr0100521"; exonic_part_number "006"; gene_id "FBgn0000008"
2R	dexseq_prepare_annotation.py	exonic_part	18050410	18051199	.	+	.	transcripts "FBtr0071764+FBtr0071763+FBtr0100521"; exonic_part_number "007"; gene_id "FBgn0000008"
2R	dexseq_prepare_annotation.py	exonic_part	18052282	18052494	.	+	.	transcripts "FBtr0071764+FBtr0071763+FBtr0100521"; exonic_part_number "008"; gene_id "FBgn0000008"
2R	dexseq_prepare_annotation.py	exonic_part	18056749	18058222	.	+	.	transcripts "FBtr0071764+FBtr0071763+FBtr0100521"; exonic_part_number "009"; gene_id "FBgn0000008"
2R	dexseq_prepare_annotation.py	exonic_part	18058283	18059490	.	+	.	transcripts "FBtr0071764+FBtr0071763+FBtr0100521"; exonic_part_number "010"; gene_id "FBgn0000008"
2R	dexseq_prepare_annotation.py	exonic_part	18059587	18059757	.	+	.	transcripts "FBtr0071764+FBtr0071763+FBtr0100521"; exonic_part_number "011"; gene_id "FBgn0000008"
2R	dexseq_prepare_annotation.py	exonic_part	18059821	18059938	.	+	.	transcripts "FBtr0071764+FBtr0071763+FBtr0100521"; exonic_part_number "012"; gene_id "FBgn0000008"
2R	dexseq_prepare_annotation.py	exonic_part	18060002	18060339	.	+	.	transcripts "FBtr0071764+FBtr0071763+FBtr0100521"; exonic_part_number "013"; gene_id "FBgn0000008"
2R	dexseq_prepare_annotation.py	exonic_part	18060340	18060346	.	+	.	transcripts "FBtr0071763+FBtr0071764"; exonic_part_number "014"; gene_id "FBgn0000008"
2R	dexseq_prepare_annotation.py	aggregate_gene	20266159	20277235	.	-	.	gene_id "FBgn0000037"
2R	dexseq_prepare_annotation.py	exonic_part	20266159	20269379	.	-	.	transcripts "FBtr0072367+FBtr0072368"; exonic_part_number "001"; gene_id "FBgn0000037"
2R	dexseq_prepare_annotation.py	exonic_part	20270713	20270763	.	-	.	transcripts "FBtr0072368"; exonic_part_number "002"; gene_id "FBgn0000037"
2R	dexseq_prepare_annotation.py	exonic_part	20270764	20270900	.	-	.	transcripts "FBtr0072367+FBtr0072368"; exonic_part_number "003"; gene_id "FBgn0000037"
2R	dexseq_prepare_annotation.py	exonic_part	20270959	20271142	.	-	.	transcripts "FBtr0072367+FBtr0072368"; exonic_part_number "004"; gene_id "FBgn0000037"
2R	dexseq_prepare_annotation.py	exonic_part	20271447	20272571	.	-	.	transcripts "FBtr0072367+FBtr0072368"; exonic_part_number "005"; gene_id "FBgn0000037"
2R	dexseq_prepare_annotation.py	exonic_part	20277121	20277235	.	-	.	transcripts "FBtr0072367+FBtr0072368"; exonic_part_number "006"; gene_id "FBgn0000037"
3L	dexseq_prepare_annotation.py	aggregate_gene	1883892	1884885	.	-	.	gene_id "FBgn0000109"
3L	dexseq_prepare_annotation.py	exonic_part	1883892	1884248	.	-	.	transcripts "FBtr0089420"; exonic_part_number "001"; gene_id "FBgn0000109"
3L	dexseq_prepare_annotation.py	exonic_part	1884323	1884560	.	-	.	transcripts "FBtr0089420"; exonic_part_number "002"; gene_id "FBgn0000109"
3L	dexseq_prepare_annotation.py	exonic_part	1884691	1884885	.	-	.	transcripts "FBtr0089420"; exonic_part_number "003"; gene_id "FBgn0000109"
3L	dexseq_prepare_annotation.py	aggregate_gene	4429349	4435993	.	+	.	gene_id "FBgn0000038"
3L	dexseq_prepare_annotation.py	exonic_part	4429349	4429502	.	+	.	transcripts "FBtr0073299+FBtr0073300"; exonic_part_number "001"; gene_id "FBgn0000038"
3L	dexseq_prepare_annotation.py	exonic_part	4429566	4429715	.	+	.	transcripts "FBtr0073299+FBtr0073300"; exonic_part_number "002"; gene_id "FBgn0000038"
3L	dexseq_prepare_annotation.py	exonic_part	4429716	4430229	.	+	.	transcripts "FBtr0073300"; exonic_part_number "003"; gene_id "FBgn0000038"
3L	dexseq_prepare_annotation.py	exonic_part	4432386	4432522	.	+	.	transcripts "FBtr0073299"; exonic_part_number "004"; gene_id "FBgn0000038"
3L	dexseq_prepare_annotation.py	exonic_part	4433305	4433459	.	+	.	transcripts "FBtr0073299"; exonic_part_number "005"; gene_id "FBgn0000038"
3L	dexseq_prepare_annotation.py	exonic_part	4433615	4434059	.	+	.	transcripts "FBtr0073299"; exonic_part_number "006"; gene_id "FBgn0000038"
3L	dexseq_prepare_annotation.py	exonic_part	4434490	4435089	.	+	.	transcripts "FBtr0073299"; exonic_part_number "007"; gene_id "FBgn0000038"
3L	dexseq_prepare_annotation.py	exonic_part	4435175	4435993	.	+	.	transcripts "FBtr0073299"; exonic_part_number "008"; gene_id "FBgn0000038"
3L	dexseq_prepare_annotation.py	aggregate_gene	8640361	8642036	.	-	.	gene_id "FBgn0000121"
3L	dexseq_prepare_annotation.py	exonic_part	8640361	8640745	.	-	.	transcripts "FBtr0076599"; exonic_part_number "001"; gene_id "FBgn0000121"
3L	dexseq_prepare_annotation.py	exonic_part	8640808	8641002	.	-	.	transcripts "FBtr0076599"; exonic_part_number "002"; gene_id "FBgn0000121"
3L	dexseq_prepare_annotation.py	exonic_part	8641070	8642036	.	-	.	transcripts "FBtr0076599"; exonic_part_number "003"; gene_id "FBgn0000121"
3L	dexseq_prepare_annotation.py	aggregate_gene	9041980	9059127	.	-	.	gene_id "FBgn0000116"
3L	dexseq_prepare_annotation.py	exonic_part	9041980	9043459	.	-	.	transcripts "FBtr0331550+FBtr0112791+FBtr0076543+FBtr0076545+FBtr0076544+FBtr0076546"; exonic_part_number "001"; gene_id "FBgn0000116"
3L	dexseq_prepare_annotation.py	exonic_part	9044230	9044817	.	-	.	transcripts "FBtr0331550+FBtr0076546"; exonic_part_number "002"; gene_id "FBgn0000116"
3L	dexseq_prepare_annotation.py	exonic_part	9044818	9045001	.	-	.	transcripts "FBtr0076546"; exonic_part_number "003"; gene_id "FBgn0000116"
3L	dexseq_prepare_annotation.py	exonic_part	9046620	9046661	.	-	.	transcripts "FBtr0331550"; exonic_part_number "004"; gene_id "FBgn0000116"
3L	dexseq_prepare_annotation.py	exonic_part	9050643	9050681	.	-	.	transcripts "FBtr0076545"; exonic_part_number "005"; gene_id "FBgn0000116"
3L	dexseq_prepare_annotation.py	exonic_part	9055007	9055567	.	-	.	transcripts "FBtr0076543+FBtr0076544"; exonic_part_number "006"; gene_id "FBgn0000116"
3L	dexseq_prepare_annotation.py	exonic_part	9055912	9056048	.	-	.	transcripts "FBtr0076544"; exonic_part_number "007"; gene_id "FBgn0000116"
3L	dexseq_prepare_annotation.py	exonic_part	9057564	9057617	.	-	.	transcripts "FBtr0112791+FBtr0076543"; exonic_part_number "008"; gene_id "FBgn0000116"
3L	dexseq_prepare_annotation.py	exonic_part	9058808	9059127	.	-	.	transcripts "FBtr0112791+FBtr0076543"; exonic_part_number "009"; gene_id "FBgn0000116"
3L	dexseq_prepare_annotation.py	aggregate_gene	15976235	15977462	.	+	.	gene_id "FBgn0000115"
3L	dexseq_prepare_annotation.py	exonic_part	15976235	15976380	.	+	.	transcripts "FBtr0075517"; exonic_part_number "001"; gene_id "FBgn0000115"
3L	dexseq_prepare_annotation.py	exonic_part	15976478	15976694	.	+	.	transcripts "FBtr0075517"; exonic_part_number "002"; gene_id "FBgn0000115"
3L	dexseq_prepare_annotation.py	exonic_part	15976963	15977462	.	+	.	transcripts "FBtr0075517"; exonic_part_number "003"; gene_id "FBgn0000115"
3L	dexseq_prepare_annotation.py	aggregate_gene	16615470	16640982	.	-	.	gene_id "FBgn0000017"
3L	dexseq_prepare_annotation.py	exonic_part	16615470	16616388	.	-	.	transcripts "FBtr0075357+FBtr0330136+FBtr0112790+FBtr0330135+FBtr0330134+FBtr0330133+FBtr0330132+FBtr0330131+FBtr0330130"; exonic_part_number "001"; gene_id "FBgn0000017"
3L	dexseq_prepare_annotation.py	exonic_part	16616389	16616736	.	-	.	transcripts "FBtr0330136+FBtr0075357+FBtr0330133+FBtr0112790+FBtr0330130"; exonic_part_number "002"; gene_id "FBgn0000017"
3L	dexseq_prepare_annotation.py	exonic_part	16616737	16618374	.	-	.	transcripts "FBtr0075357+FBtr0330136+FBtr0112790+FBtr0330135+FBtr0330134+FBtr0330133+FBtr0330132+FBtr0330131+FBtr0330130"; exonic_part_number "003"; gene_id "FBgn0000017"
3L	dexseq_prepare_annotation.py	exonic_part	16619373	16619627	.	-	.	transcripts "FBtr0330133+FBtr0330132+FBtr0330131+FBtr0330130"; exonic_part_number "004"; gene_id "FBgn0000017"
3L	dexseq_prepare_annotation.py	exonic_part	16619628	16619716	.	-	.	transcripts "FBtr0075357+FBtr0330136+FBtr0112790+FBtr0330135+FBtr0330134+FBtr0330133+FBtr0330132+FBtr0330131+FBtr0330130"; exonic_part_number "005"; gene_id "FBgn0000017"
3L	dexseq_prepare_annotation.py	exonic_part	16619843	16619963	.	-	.	transcripts "FBtr0075357+FBtr0330136+FBtr0112790+FBtr0330135+FBtr0330134+FBtr0330133+FBtr0330132+FBtr0330131+FBtr0330130"; exonic_part_number "006"; gene_id "FBgn0000017"
3L	dexseq_prepare_annotation.py	exonic_part	16620022	16620292	.	-	.	transcripts "FBtr0075357+FBtr0330136+FBtr0112790+FBtr0330135+FBtr0330134+FBtr0330133+FBtr0330132+FBtr0330131+FBtr0330130"; exonic_part_number "007"; gene_id "FBgn0000017"
3L	dexseq_prepare_annotation.py	exonic_part	16620602	16621188	.	-	.	transcripts "FBtr0075357+FBtr0330136+FBtr0112790+FBtr0330135+FBtr0330134+FBtr0330133+FBtr0330132+FBtr0330131+FBtr0330130"; exonic_part_number "008"; gene_id "FBgn0000017"
3L	dexseq_prepare_annotation.py	exonic_part	16621274	16621689	.	-	.	transcripts "FBtr0075357+FBtr0330136+FBtr0112790+FBtr0330135+FBtr0330134+FBtr0330133+FBtr0330132+FBtr0330131+FBtr0330130"; exonic_part_number "009"; gene_id "FBgn0000017"
3L	dexseq_prepare_annotation.py	exonic_part	16621763	16622306	.	-	.	transcripts "FBtr0075357+FBtr0330136+FBtr0112790+FBtr0330135+FBtr0330134+FBtr0330133+FBtr0330132+FBtr0330131+FBtr0330130"; exonic_part_number "010"; gene_id "FBgn0000017"
3L	dexseq_prepare_annotation.py	exonic_part	16624477	16624530	.	-	.	transcripts "FBtr0330136+FBtr0330134+FBtr0330133+FBtr0330131+FBtr0112790"; exonic_part_number "011"; gene_id "FBgn0000017"
3L	dexseq_prepare_annotation.py	exonic_part	16639910	16640982	.	-	.	transcripts "FBtr0075357+FBtr0330136+FBtr0112790+FBtr0330135+FBtr0330134+FBtr0330133+FBtr0330132+FBtr0330131+FBtr0330130"; exonic_part_number "012"; gene_id "FBgn0000017"
3L	dexseq_prepare_annotation.py	aggregate_gene	21978310	21980290	.	+	.	gene_id "FBgn0000045"
3L	dexseq_prepare_annotation.py	exonic_part	21978310	21978348	.	+	.	transcripts "FBtr0334090+FBtr0078478"; exonic_part_number "001"; gene_id "FBgn0000045"
3L	dexseq_prepare_annotation.py	exonic_part	21978349	21978424	.	+	.	transcripts "FBtr0334090"; exonic_part_number "002"; gene_id "FBgn0000045"
3L	dexseq_prepare_annotation.py	exonic_part	21978425	21979375	.	+	.	transcripts "FBtr0334090+FBtr0078478"; exonic_part_number "003"; gene_id "FBgn0000045"
3L	dexseq_prepare_annotation.py	exonic_part	21979738	21980290	.	+	.	transcripts "FBtr0334090+FBtr0078478"; exonic_part_number "004"; gene_id "FBgn0000045"
3L	dexseq_prepare_annotation.py	aggregate_gene	22068967	22070587	.	+	.	gene_id "FBgn0000100"
3L	dexseq_prepare_annotation.py	exonic_part	22068967	22069026	.	+	.	transcripts "FBtr0334113"; exonic_part_number "001"; gene_id "FBgn0000100"
3L	dexseq_prepare_annotation.py	exonic_part	22069135	22069191	.	+	.	transcripts "FBtr0334113"; exonic_part_number "002"; gene_id "FBgn0000100"
3L	dexseq_prepare_annotation.py	exonic_part	22069192	22069236	.	+	.	transcripts "FBtr0078481+FBtr0334113"; exonic_part_number "003"; gene_id "FBgn0000100"
3L	dexseq_prepare_annotation.py	exonic_part	22069348	22069441	.	+	.	transcripts "FBtr0078481+FBtr0334113"; exonic_part_number "004"; gene_id "FBgn0000100"
3L	dexseq_prepare_annotation.py	exonic_part	22069516	22070587	.	+	.	transcripts "FBtr0078481+FBtr0334113"; exonic_part_number "005"; gene_id "FBgn0000100"
3R	dexseq_prepare_annotation.py	aggregate_gene	2588315	2590983	.	+	.	gene_id "FBgn0000071"
3R	dexseq_prepare_annotation.py	exonic_part	2588315	2588718	.	+	.	transcripts "FBtr0081618"; exonic_part_number "001"; gene_id "FBgn0000071"
3R	dexseq_prepare_annotation.py	exonic_part	2589128	2589222	.	+	.	transcripts "FBtr0081619+FBtr0081620"; exonic_part_number "002"; gene_id "FBgn0000071"
3R	dexseq_prepare_annotation.py	exonic_part	2589223	2589238	.	+	.	transcripts "FBtr0081619"; exonic_part_number "003"; gene_id "FBgn0000071"
3R	dexseq_prepare_annotation.py	exonic_part	2589555	2590983	.	+	.	transcripts "FBtr0081619+FBtr0081618+FBtr0081620"; exonic_part_number "004"; gene_id "FBgn0000071"
3R	dexseq_prepare_annotation.py	aggregate_gene	2648220	2648518	.	+	.	gene_id "FBgn0000003"
3R	dexseq_prepare_annotation.py	exonic_part	2648220	2648518	.	+	.	transcripts "FBtr0081624"; exonic_part_number "001"; gene_id "FBgn0000003"
3R	dexseq_prepare_annotation.py	aggregate_gene	9053964	9085240	.	-	.	gene_id "FBgn0000024"
3R	dexseq_prepare_annotation.py	exonic_part	9053964	9055492	.	-	.	transcripts "FBtr0082780+FBtr0300486"; exonic_part_number "001"; gene_id "FBgn0000024"
3R	dexseq_prepare_annotation.py	exonic_part	9058401	9058564	.	-	.	transcripts "FBtr0082780+FBtr0300486"; exonic_part_number "002"; gene_id "FBgn0000024"
3R	dexseq_prepare_annotation.py	exonic_part	9058683	9058846	.	-	.	transcripts "FBtr0082780+FBtr0300486"; exonic_part_number "003"; gene_id "FBgn0000024"
3R	dexseq_prepare_annotation.py	exonic_part	9062851	9063000	.	-	.	transcripts "FBtr0082780+FBtr0300486"; exonic_part_number "004"; gene_id "FBgn0000024"
3R	dexseq_prepare_annotation.py	exonic_part	9063779	9063921	.	-	.	transcripts "FBtr0082780+FBtr0300486"; exonic_part_number "005"; gene_id "FBgn0000024"
3R	dexseq_prepare_annotation.py	exonic_part	9068941	9069148	.	-	.	transcripts "FBtr0082780+FBtr0300486"; exonic_part_number "006"; gene_id "FBgn0000024"
3R	dexseq_prepare_annotation.py	exonic_part	9069308	9069853	.	-	.	transcripts "FBtr0082780+FBtr0300486"; exonic_part_number "007"; gene_id "FBgn0000024"
3R	dexseq_prepare_annotation.py	exonic_part	9069983	9070121	.	-	.	transcripts "FBtr0082780+FBtr0300486"; exonic_part_number "008"; gene_id "FBgn0000024"
3R	dexseq_prepare_annotation.py	exonic_part	9071532	9072376	.	-	.	transcripts "FBtr0082780+FBtr0300486"; exonic_part_number "009"; gene_id "FBgn0000024"
3R	dexseq_prepare_annotation.py	exonic_part	9084025	9084147	.	-	.	transcripts "FBtr0082780+FBtr0300486"; exonic_part_number "010"; gene_id "FBgn0000024"
3R	dexseq_prepare_annotation.py	exonic_part	9084148	9084590	.	-	.	transcripts "FBtr0082780"; exonic_part_number "011"; gene_id "FBgn0000024"
3R	dexseq_prepare_annotation.py	exonic_part	9085175	9085240	.	-	.	transcripts "FBtr0300486"; exonic_part_number "012"; gene_id "FBgn0000024"
3R	dexseq_prepare_annotation.py	aggregate_gene	9251707	9253811	.	+	.	gene_id "FBgn0000046"
3R	dexseq_prepare_annotation.py	exonic_part	9251707	9251764	.	+	.	transcripts "FBtr0082785"; exonic_part_number "001"; gene_id "FBgn0000046"
3R	dexseq_prepare_annotation.py	exonic_part	9252169	9252304	.	+	.	transcripts "FBtr0082786"; exonic_part_number "002"; gene_id "FBgn0000046"
3R	dexseq_prepare_annotation.py	exonic_part	9252305	9253811	.	+	.	transcripts "FBtr0082785+FBtr0082786"; exonic_part_number "003"; gene_id "FBgn0000046"
3R	dexseq_prepare_annotation.py	aggregate_gene	11265710	11267895	.	+	.	gene_id "FBgn0000047"
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3R	dexseq_prepare_annotation.py	exonic_part	11266322	11267262	.	+	.	transcripts "FBtr0083143"; exonic_part_number "002"; gene_id "FBgn0000047"
3R	dexseq_prepare_annotation.py	exonic_part	11267324	11267895	.	+	.	transcripts "FBtr0083143"; exonic_part_number "003"; gene_id "FBgn0000047"
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X	dexseq_prepare_annotation.py	aggregate_gene	2586765	2587919	.	-	.	gene_id "FBgn0000092"
X	dexseq_prepare_annotation.py	exonic_part	2586765	2587130	.	-	.	transcripts "FBtr0070504"; exonic_part_number "001"; gene_id "FBgn0000092"
X	dexseq_prepare_annotation.py	exonic_part	2587189	2587681	.	-	.	transcripts "FBtr0070504"; exonic_part_number "002"; gene_id "FBgn0000092"
X	dexseq_prepare_annotation.py	exonic_part	2587766	2587919	.	-	.	transcripts "FBtr0070504"; exonic_part_number "003"; gene_id "FBgn0000092"
X	dexseq_prepare_annotation.py	aggregate_gene	5794894	5799261	.	+	.	gene_id "FBgn0000042"
X	dexseq_prepare_annotation.py	exonic_part	5794894	5795046	.	+	.	transcripts "FBtr0100662+FBtr0100663+FBtr0070822"; exonic_part_number "001"; gene_id "FBgn0000042"
X	dexseq_prepare_annotation.py	exonic_part	5796015	5796129	.	+	.	transcripts "FBtr0070823"; exonic_part_number "002"; gene_id "FBgn0000042"
X	dexseq_prepare_annotation.py	exonic_part	5796723	5798206	.	+	.	transcripts "FBtr0100662+FBtr0100663+FBtr0070822+FBtr0070823"; exonic_part_number "003"; gene_id "FBgn0000042"
X	dexseq_prepare_annotation.py	exonic_part	5798207	5798497	.	+	.	transcripts "FBtr0100662+FBtr0100663+FBtr0070823"; exonic_part_number "004"; gene_id "FBgn0000042"
X	dexseq_prepare_annotation.py	exonic_part	5798498	5798821	.	+	.	transcripts "FBtr0100662+FBtr0070823"; exonic_part_number "005"; gene_id "FBgn0000042"
X	dexseq_prepare_annotation.py	exonic_part	5798822	5799261	.	+	.	transcripts "FBtr0070823"; exonic_part_number "006"; gene_id "FBgn0000042"
X	dexseq_prepare_annotation.py	aggregate_gene	9139948	9141369	.	-	.	gene_id "FBgn0000077"
X	dexseq_prepare_annotation.py	exonic_part	9139948	9140185	.	-	.	transcripts "FBtr0071331"; exonic_part_number "001"; gene_id "FBgn0000077"
X	dexseq_prepare_annotation.py	exonic_part	9140186	9141158	.	-	.	transcripts "FBtr0071331+FBtr0307281"; exonic_part_number "002"; gene_id "FBgn0000077"
X	dexseq_prepare_annotation.py	exonic_part	9141159	9141369	.	-	.	transcripts "FBtr0071331"; exonic_part_number "003"; gene_id "FBgn0000077"
X	dexseq_prepare_annotation.py	aggregate_gene	15245315	15272487	.	-	.	gene_id "FBgn0000028"
X	dexseq_prepare_annotation.py	exonic_part	15245315	15245991	.	-	.	transcripts "FBtr0100328+FBtr0305191"; exonic_part_number "001"; gene_id "FBgn0000028"
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X	dexseq_prepare_annotation.py	aggregate_gene	20065478	20067552	.	-	.	gene_id "FBgn0000084"
X	dexseq_prepare_annotation.py	exonic_part	20065478	20065681	.	-	.	transcripts "FBtr0070025+FBtr0301931"; exonic_part_number "001"; gene_id "FBgn0000084"
X	dexseq_prepare_annotation.py	exonic_part	20065962	20065964	.	-	.	transcripts "FBtr0301931"; exonic_part_number "002"; gene_id "FBgn0000084"
X	dexseq_prepare_annotation.py	exonic_part	20066074	20066255	.	-	.	transcripts "FBtr0070025+FBtr0301931"; exonic_part_number "003"; gene_id "FBgn0000084"
X	dexseq_prepare_annotation.py	exonic_part	20066338	20067049	.	-	.	transcripts "FBtr0070025+FBtr0301931"; exonic_part_number "004"; gene_id "FBgn0000084"
X	dexseq_prepare_annotation.py	exonic_part	20067402	20067506	.	-	.	transcripts "FBtr0070025+FBtr0301931"; exonic_part_number "005"; gene_id "FBgn0000084"
X	dexseq_prepare_annotation.py	exonic_part	20067507	20067552	.	-	.	transcripts "FBtr0070025"; exonic_part_number "006"; gene_id "FBgn0000084"