Mercurial > repos > iuc > dimet_pca_plot

comparison test-data/abundance--med-Control-T0-L-Cycloserine-T0-Tt.tsv @ 3:b6faa1142f83 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/DIMet commit 0e7c185547d51ec3fc8ff2d87ac7e2b6d9ae0b0f
author iuc
date Mon, 04 Mar 2024 19:56:22 +0000
parents 952808ffa842
children
comparison
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2:23f87b8cc62b 3:b6faa1142f83
1 metabolite log2FC pvalue padj distance/span FC count_nan_samples_group1 count_nan_samples_group2 distance span_allsamples compartment Ctrl_med_T0-1 Ctrl_med_T0-2 L-Cyc_med_T0-1 L-Cyc_med_T0-2 gmean_1 gmean_2 1 metabolite log2FC pvalue padj distance/span FC count_nan_samples_group1 count_nan_samples_group2 distance span_allsamples compartment Ctrl_med_T0-1 Ctrl_med_T0-2 L-Cyc_med_T0-1 L-Cyc_med_T0-2 gmean_1 gmean_2
2 L-Valine -0.06551 0.004613 0.078425 0.830536 0.955607 0 0 1.806475 2.175072 med 42.7862 42.917067 44.961272 44.723542 42.851584 44.842249 2 L-Valine -0.06551 0.004613 0.078425 0.830536 0.955607 0.0 0.0 1.806475 2.175072 med 42.7862 42.917067 44.961272 44.723542 42.851584 44.842249
3 L-Lactic_acid 0.081287 0.035485 0.603247 0.64986 1.057961 0 0 1.519643 2.338416 med 35.285733 35.209883 33.69024 32.947317 35.247788 33.316708 3 L-Lactic_acid 0.081287 0.035485 0.603247 0.64986 1.057961 0.0 0.0 1.519643 2.338416 med 35.285733 35.209883 33.69024 32.947317 35.247788 33.316708
4 L-Arginine 0.006662 0.038909 0.661461 0.622566 1.004628 0 0 1.475052 2.369309 med 417.573697 416.802075 415.204388 415.327023 417.187708 415.265701 4 L-Arginine 0.006662 0.038909 0.661461 0.622566 1.004628 0.0 0.0 1.475052 2.369309 med 417.573697 416.802075 415.204388 415.327023 417.187708 415.265701
5 L-Proline -0.114311 0.052379 0.890451 0.495962 0.923823 0 0 1.256673 2.533809 med 22.674872 23.296347 25.208681 24.55302 22.983509 24.878691 5 L-Proline -0.114311 0.052379 0.890451 0.495962 0.923823 0.0 0.0 1.256673 2.533809 med 22.674872 23.296347 25.208681 24.55302 22.983509 24.878691
6 Hexose-phosphate -0.152217 0.121088 1.0 0.441254 0.899867 0 0 1.07635 2.439298 med 15.686678 15.672772 18.11207 16.763028 15.679723 17.424498 6 L-Phenylalanine -0.070754 0.112054 1.0 0.327323 0.95214 0.0 0.0 0.875883 2.675902 med 34.932908 35.642687 37.60881 36.51857 35.286013 37.059681
7 L-Tryptophan 0.139342 0.13131 1.0 0.32956 1.101403 0 0 0.861293 2.613467 med 18.793992 19.207497 17.932699 16.59403 18.99962 17.250384 7 L-Methionine -0.05948 0.121063 1.0 0.296729 0.95961 0.0 0.0 0.804505 2.711241 med 41.3005 42.222702 44.011741 43.027207 41.759055 43.51669
8 L-Phenylalanine -0.070754 0.112054 1.0 0.327323 0.95214 0 0 0.875883 2.675902 med 34.932908 35.642687 37.60881 36.51857 35.286013 37.059681 8 Hexose-phosphate -0.152217 0.121088 1.0 0.441254 0.899867 0.0 0.0 1.07635 2.439298 med 15.686678 15.672772 18.11207 16.763028 15.679723 17.424498
9 L-Methionine -0.05948 0.121063 1.0 0.296729 0.95961 0 0 0.804505 2.711241 med 41.3005 42.222702 44.011741 43.027207 41.759055 43.51669 9 L-Tryptophan 0.139342 0.13131 1.0 0.32956 1.101403 0.0 0.0 0.861293 2.613467 med 18.793992 19.207497 17.932699 16.59403 18.99962 17.250384
10 L-Alanine -0.186768 0.189622 1.0 0.161521 0.878572 0 0 0.450765 2.790747 med 11.17805 12.28269 13.968797 12.733455 11.71736 13.336831 10 L-Alanine -0.186768 0.189622 1.0 0.161521 0.878572 0.0 0.0 0.450765 2.790747 med 11.17805 12.28269 13.968797 12.733455 11.71736 13.336831
11 Ile_Leu -0.067879 0.266664 1.0 0.038434 0.95404 0 0 0.108567 2.824776 med 29.783216 31.074798 32.607992 31.183365 30.422153 31.887724 11 Ile_Leu -0.067879 0.266664 1.0 0.038434 0.95404 0.0 0.0 0.108567 2.824776 med 29.783216 31.074798 32.607992 31.183365 30.422153 31.887724
12 Glycine -0.40224 0.406096 1.0 0.003298 0.756683 0 0 0.00781 2.367806 med 3.275612 3.189559 5.557365 3.283422 3.232299 4.271671 12 Pyruvic_acid -0.059155 0.334667 1.0 0.001586 0.959826 0.0 0.0 0.004213 2.65712 med 33.153112 31.141204 33.798324 33.157325 32.131415 33.47629
13 Pyruvic_acid -0.059155 0.334667 1.0 0.001586 0.959826 0 0 0.004213 2.65712 med 33.153112 31.141204 33.798324 33.157325 32.131415 33.47629 13 Glycine -0.40224 0.406096 1.0 0.003298 0.756683 0.0 0.0 0.00781 2.367806 med 3.275612 3.189559 5.557365 3.283422 3.232299 4.271671
14 L-Lysine -0.001834 0.946483 1.0 -0.206473 0.99873 0 0 -0.57111 2.766029 med 90.619429 93.385458 92.395033 91.823923 91.992048 92.109035 14 L-Threonine -0.019183 0.467268 1.0 -0.208828 0.986792 0.0 0.0 -0.562452 2.693379 med 81.007696 78.916447 81.609826 80.445244 79.955235 81.025443
15 L-Threonine -0.019183 0.467268 1.0 -0.208828 0.986792 0 0 -0.562452 2.693379 med 81.007696 78.916447 81.609826 80.445244 79.955235 81.025443 15 L-Asparagine 0.051495 0.479539 1.0 -0.240516 1.036338 0.0 0.0 -0.659285 2.74113 med 30.611703 29.072045 29.73133 27.870573 29.831943 28.78592
16 L-Asparagine 0.051495 0.479539 1.0 -0.240516 1.036338 0 0 -0.659285 2.74113 med 30.611703 29.072045 29.73133 27.870573 29.831943 28.78592 16 L-Histidine 0.020108 0.536681 -0.307902 1.014035 0.0 0.0 -0.82449 2.677766 med 66.478417 67.955877 65.278111 67.302907 67.213087 66.282778
17 Hexose 0.007394 0.632326 1.0 -0.248644 1.005138 0 0 -0.634685 2.552587 med 141.526046 144.078633 142.384333 141.749648 142.796636 142.066636 17 L-Tyrosine -0.024305 0.567197 -0.345223 0.983294 0.0 0.0 -0.912759 2.643971 med 49.917227 51.3987 52.561198 50.485941 50.652548 51.51312
18 L-Serine -0.003785 0.885659 1.0 -0.258807 0.99738 0 0 -0.70402 2.720251 med 82.756733 83.460753 84.697551 81.9773 83.107998 83.326326 18 Hexose 0.007394 0.632326 1.0 -0.248644 1.005138 0.0 0.0 -0.634685 2.552587 med 141.526046 144.078633 142.384333 141.749648 142.796636 142.066636
19 L-Histidine 0.020108 0.536681 -0.307902 1.014035 0 0 -0.82449 2.677766 med 66.478417 67.955877 65.278111 67.302907 67.213087 66.282778 19 L-Serine -0.003785 0.885659 1.0 -0.258807 0.99738 0.0 0.0 -0.70402 2.720251 med 82.756733 83.460753 84.697551 81.9773 83.107998 83.326326
20 L-Tyrosine -0.024305 0.567197 -0.345223 0.983294 0 0 -0.912759 2.643971 med 49.917227 51.3987 52.561198 50.485941 50.652548 51.51312 20 L-Lysine -0.001834 0.946483 1.0 -0.206473 0.99873 0.0 0.0 -0.57111 2.766029 med 90.619429 93.385458 92.395033 91.823923 91.992048 92.109035