Mercurial > repos > iuc > drep_dereplicate

diff drep_dereplicate.xml @ 3:a0713a10c9f6 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/drep commit 91d5bae878afa54d8264c1ca89c79b2d26ef35ad
author iuc
date Wed, 15 Mar 2023 11:05:04 +0000
parents 368cb4bef9d8
children cafcc13990ee
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line diff
--- a/drep_dereplicate.xml	Mon Jun 27 13:40:40 2022 +0000
+++ b/drep_dereplicate.xml	Wed Mar 15 11:05:04 2023 +0000
@@ -5,7 +5,7 @@
         <import>macros.xml</import>
     </macros>
     <expand macro="requirements">
-        <requirement type="package" version="1.2.0">checkm-genome</requirement>
+        <requirement type="package" version="1.2.2">checkm-genome</requirement>
     </expand>
     <command detect_errors="exit_code"><![CDATA[
 @PREPARE_GENOMES@
@@ -56,6 +56,18 @@
             <expand macro="test_default_filtering_options"/>
             <expand macro="test_default_quality_assessment_options"/>
             <expand macro="test_default_comparison_clustering_options"/>
+            <expand macro="test_extra_weight_table_scoring_options"/>
+            <expand macro="test_default_warning_options"/>
+            <expand macro="test_default_select_drep_outputs"/>
+            <expand macro="test_log_output">
+                <has_text text="dRep dereplicate finished" />
+            </expand>
+        </test>
+        <test expect_num_outputs="8">
+            <expand macro="test_string_inputs"/>
+            <expand macro="test_default_filtering_options"/>
+            <expand macro="test_default_quality_assessment_options"/>
+            <expand macro="test_default_comparison_clustering_options"/>
             <expand macro="test_default_scoring_options"/>
             <expand macro="test_default_warning_options"/>
             <expand macro="test_default_select_drep_outputs"/>