Mercurial > repos > iuc > ebi_metagenomics_run_downloader
comparison ebeye_urllib.py @ 2:6155fa39a899 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ebi_tools commit 19ea4feff5ccf3744c549b9a67259947a1cb90ba
author | iuc |
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date | Sat, 21 Jan 2017 14:40:54 -0500 |
parents | e2e9fae080ad |
children | a1ef6c88ee37 |
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1:d4e7e110dfdb | 2:6155fa39a899 |
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3 # Script derived from the EB-eye (REST) Python client available at | 3 # Script derived from the EB-eye (REST) Python client available at |
4 # http://www.ebi.ac.uk/Tools/webservices/services/eb-eye_rest | 4 # http://www.ebi.ac.uk/Tools/webservices/services/eb-eye_rest |
5 # and distributed under the Apache License | 5 # and distributed under the Apache License |
6 # ====================================================================== | 6 # ====================================================================== |
7 # Load libraries | 7 # Load libraries |
8 import os | |
8 import platform | 9 import platform |
9 import os | 10 import re |
10 import urllib | 11 import urllib |
11 import re | 12 import urllib2 |
13 from gzip import GzipFile | |
12 from optparse import OptionParser | 14 from optparse import OptionParser |
13 from gzip import GzipFile | 15 from StringIO import StringIO |
16 | |
14 from xmltramp2 import xmltramp | 17 from xmltramp2 import xmltramp |
15 # python2 | |
16 from StringIO import StringIO | |
17 import urllib2 | |
18 # python3 | |
19 # import urllib.request as urllib2 | |
20 | |
21 | 18 |
22 # Service base URL | 19 # Service base URL |
23 baseUrl = 'http://www.ebi.ac.uk/ebisearch/ws/rest' | 20 baseUrl = 'http://www.ebi.ac.uk/ebisearch/ws/rest' |
24 | 21 |
25 # Debug level | 22 # Debug level |