Mercurial > repos > iuc > ebi_metagenomics_run_downloader

comparison ebeye_urllib.py @ 3:a1ef6c88ee37 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ebi_tools commit 31d1c92a4c12b6a78693dc5091a08536a075285e
author iuc
date Thu, 09 Feb 2017 12:02:47 -0500
parents 6155fa39a899
children
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2:6155fa39a899 3:a1ef6c88ee37
3 # Script derived from the EB-eye (REST) Python client available at 3 # Script derived from the EB-eye (REST) Python client available at
4 # http://www.ebi.ac.uk/Tools/webservices/services/eb-eye_rest 4 # http://www.ebi.ac.uk/Tools/webservices/services/eb-eye_rest
5 # and distributed under the Apache License 5 # and distributed under the Apache License
6 # ====================================================================== 6 # ======================================================================
7 # Load libraries 7 # Load libraries
8
9 from __future__ import print_function
10
8 import os 11 import os
9 import platform 12 import platform
10 import re 13 import re
11 import urllib 14 import urllib
12 import urllib2 15 import urllib2
267 for fieldurl in entry['fieldURLs']['fieldURL':]: 270 for fieldurl in entry['fieldURLs']['fieldURL':]:
268 fieldURL += str(fieldurl) 271 fieldURL += str(fieldurl)
269 printDebugMessage('getEntries', 'End', 1) 272 printDebugMessage('getEntries', 'End', 1)
270 p = re.compile('http') 273 p = re.compile('http')
271 fieldURL = p.sub('https', fieldURL) 274 fieldURL = p.sub('https', fieldURL)
272 print fieldURL 275 print(fieldURL)
273 276
274 277
275 if __name__ == '__main__': 278 if __name__ == '__main__':
276 # Usage message 279 # Usage message
277 usage = """ 280 usage = """