Mercurial > repos > iuc > egsea
diff test-data/out_il13.html @ 0:a8a083193440 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/egsea commit 7d0c7d850cd56ea3e54d8c03266f719241b20b8b
| author | iuc |
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| date | Thu, 25 Jan 2018 02:23:23 -0500 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/out_il13.html Thu Jan 25 02:23:23 2018 -0500 @@ -0,0 +1,28 @@ +<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd"> +<html xmlns='http://www.w3.org/1999/xhtml' xml:lang='en' lang='en'><head> +<meta http-equiv="Content-Type" content="text/html; charset=utf-8"></meta> +<title>Ensemble of Gene +Set Enrichment Analyses (EGSEA) - Report</title> + + + +</head> +<body><h1><div><img src="EGSEA_logo.png" width="150" style="float:left;"></img><h1 style="color:#0f284f; position:relative; top:18px; left:10px;">Gene Set Testing Report</h1></div></h1><br/> +<h2 style="color:#22519b">Analysis Parameters</h2><b>Total number of genes: </b>17343<br/> +<b>Total number of samples: </b>5<br/> +<b>Number of contrasts: </b>1<br/> +<b>Base GSEA methods: </b>camera (limma:3.34.1), globaltest (globaltest:5.32.0), ora (stats:3.4.1)<br/> +<b>P-value combine method: </b>wilkinson<br/> +<b>Sorting statistic: </b>med.rank<br/> +<b>Fold changes calculated: </b>Yes<br/> +<b>Gene IDs - Symbols mapping used: </b>Yes<br/> +<b>Organism: </b>Homo sapiens<br/> +<b>Gene set collections: </b>h Hallmark Signatures (5.2, 07 March 2017)<br/> +<b>EGSEA version: </b>1.6.0<br/> +<b>EGSEAdata version: </b>1.6.0<br/> +<h2 style="color:#22519b">Analysis Results</h2><ul style="list-style-type:square"> +<il><b>IL13Ant-IL13</b> +<ul><li>h Hallmark Signatures (<a href="./ranked-gene-sets-base/ranked-h-gene-sets-IL13Ant-IL13.html">Stats Table</a>, <a href="./hm-top-gs-h/IL13Ant-IL13-allHeatmaps.html">Heatmaps</a>, <a href="./summary/IL13Ant-IL13-h-summary.html">Summary Plots</a>, <a target="_blank" href="./ranked-gene-sets-base/ranked-h-gene-sets-IL13Ant-IL13.txt">Download +Stats</a>)</li></ul></il></ul> +<br/><br/><font size="-2">(Page generated on Mon Jan 8 03:48:44 2018 by <a href="http://www.embl.de/~gpau/hwriter/index.html">hwriter</a> )</font><br/> +</body></html> \ No newline at end of file