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comparison enasearch_retrieve_analysis_report.xml @ 0:186565dfa9e5 draft

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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/enasearch/ commit 6eda25f5cccc0cf9be09c38a8b48d37aff56ed87
author iuc
date Tue, 29 Aug 2017 04:12:50 -0400
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1 <tool id="enasearch_retrieve_analysis_report" name="Retrieve an analysis report" version="@WRAPPER_VERSION@.0">
2 <description></description>
3 <macros>
4 <import>macros.xml</import>
5 <import>search_macros.xml</import>
6 </macros>
7 <expand macro="requirements"/>
8 <expand macro="version"/>
9 <command detect_errors="aggressive"><![CDATA[
10 enasearch
11 retrieve_analysis_report
12 --accession '$accession'
13 @FIELDS@
14 --file '$output'
15 ]]></command>
16 <inputs>
17 <expand macro="accession"/>
18 <param argument="--fields" type="select" optional="true" multiple="true" label="Fields to return">
19 <expand macro="analysis_fields"/>
20 </param>
21 </inputs>
22 <outputs>
23 <data name="output" format="tabular" label="${tool.name} on ${accession}"/>
24 </outputs>
25 <tests>
26 <test>
27 <param name="accession" value="ERZ009929"/>
28 <output name="output" md5="cfcb3fb4db26e039f12f36eaa7519871"/>
29 </test>
30 <test>
31 <param name="accession" value="ERZ009929"/>
32 <param name="fields" value="analysis_accession"/>
33 <output name="output" md5="7249f93fac05d1e6746a076e1ae445b5"/>
34 </test>
35 <test>
36 <param name="accession" value="ERZ009929"/>
37 <param name="fields" value="analysis_accession,sample_accession,scientific_name"/>
38 <output name="output" md5="af4ba9b125b27525979ab6ea6a2b3637"/>
39 </test>
40 </tests>
41 <help><![CDATA[
42 **What it does**
43
44 This tool retrieve an analysis report for an accession id
45 ]]></help>
46 <expand macro="citations"/>
47 </tool>