Mercurial > repos > iuc > ensembl_vep

diff test-data/input_test2.vcf @ 0:7303183cdb87 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ensembl_vep commit 2db33cd5bcf5e2d7e3a43f11855c4cfc3b1b9f56
author iuc
date Wed, 11 May 2022 13:03:38 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/input_test2.vcf	Wed May 11 13:03:38 2022 +0000
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+##fileformat=VCFv4.1
+##contig=<ID=21,assembly=GCF_000001405.26,length=46709983>
+##contig=<ID=22,assembly=GCF_000001405.26,length=50818468>
+##ALT=<ID=CNV,Description="Copy Number Polymorphism">
+##INFO=<ID=SVLEN,Number=.,Type=Integer,Description="Difference in length between REF and ALT alleles">
+##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	HG00096
+21	5733	rs142513484	C	T	.	.	.	GT	0|0