Mercurial > repos > iuc > exonerate
annotate test-data/coding2coding.gff @ 0:f48ed38dfddf draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
| author | iuc | 
|---|---|
| date | Thu, 02 Aug 2018 09:11:30 -0400 | 
| parents | |
| children | a03dead1bede | 
| rev | line source | 
|---|---|
| 
0
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
1 # --- START OF GFF DUMP --- | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
2 # | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
3 # | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
4 ##gff-version 2 | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
5 ##source-version exonerate:coding2coding 2.4.0 | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
6 ##date 2018-08-02 | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
7 ##type DNA | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
8 # | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
9 # | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
10 # seqname source feature start end score strand frame attributes | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
11 # | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
12 sample exonerate:coding2coding similarity 1 3536 6207 + . alignment_id 1 ; Query sample ; Align 1 1 2463 ; Align 2466 2464 3 ; Align 2469 2469 1068 | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
13 # --- END OF GFF DUMP --- | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
14 # | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
15 # --- START OF GFF DUMP --- | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
16 # | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
17 # | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
18 ##gff-version 2 | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
19 ##source-version exonerate:coding2coding 2.4.0 | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
20 ##date 2018-08-02 | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
21 ##type DNA | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
22 # | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
23 # | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
24 # seqname source feature start end score strand frame attributes | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
25 # | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
26 sample exonerate:coding2coding similarity 2 3535 6151 - . alignment_id 1 ; Query sample ; Align 3536 3536 3534 | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
27 # --- END OF GFF DUMP --- | 
| 
 
f48ed38dfddf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
 
iuc 
parents:  
diff
changeset
 | 
28 # | 
