Mercurial > repos > iuc > exonerate

annotate test-data/est2genome_introns.gff3 @ 3:a03dead1bede draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit a141c63903d1a598569985e400125d4e7de42801"
author iuc
date Sun, 01 Mar 2020 04:48:34 -0500
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3
a03dead1bede "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit a141c63903d1a598569985e400125d4e7de42801"
iuc
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diff changeset
1 ##gff-version 3
a03dead1bede "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit a141c63903d1a598569985e400125d4e7de42801"
iuc
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diff changeset
2 sample exonerate:est2genome gene 2742 2819 102 - . ID=gene_1;gene_id=1;identity=58.97;sequence=sample;similarity=58.97
a03dead1bede "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit a141c63903d1a598569985e400125d4e7de42801"
iuc
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diff changeset
3 sample exonerate:est2genome mRNA 2742 2819 . - . ID=mRNA_1;Parent=gene_1
a03dead1bede "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit a141c63903d1a598569985e400125d4e7de42801"
iuc
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diff changeset
4 sample exonerate:est2genome exon 2742 2819 . - . ID=mRNA_1_exon_1;Parent=mRNA_1;deletions=0;identity=58.97;insertions=0;similarity=58.97
a03dead1bede "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit a141c63903d1a598569985e400125d4e7de42801"
iuc
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diff changeset
5 sample exonerate:est2genome CDS 2742 2819 . - 0 ID=mRNA_1_CDS;Parent=mRNA_1
a03dead1bede "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit a141c63903d1a598569985e400125d4e7de42801"
iuc
parents:
diff changeset
6 sample exonerate:est2genome gene 2146 3050 4525 + . ID=gene_2;gene_id=1;identity=100.00;sequence=sample;similarity=100.00
a03dead1bede "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit a141c63903d1a598569985e400125d4e7de42801"
iuc
parents:
diff changeset
7 sample exonerate:est2genome mRNA 2146 3050 . + . ID=mRNA_2;Parent=gene_2
a03dead1bede "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit a141c63903d1a598569985e400125d4e7de42801"
iuc
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diff changeset
8 sample exonerate:est2genome exon 2146 3050 . + . ID=mRNA_2_exon_1;Parent=mRNA_2;deletions=0;identity=100.00;insertions=0;similarity=100.00
a03dead1bede "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit a141c63903d1a598569985e400125d4e7de42801"
iuc
parents:
diff changeset
9 sample exonerate:est2genome CDS 2146 3050 . + 0 ID=mRNA_2_CDS;Parent=mRNA_2
a03dead1bede "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit a141c63903d1a598569985e400125d4e7de42801"
iuc
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diff changeset
10 sample exonerate:est2genome gene 758 1357 2861 + . ID=gene_3;gene_id=2;identity=98.33;sequence=sample;similarity=98.33
a03dead1bede "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit a141c63903d1a598569985e400125d4e7de42801"
iuc
parents:
diff changeset
11 sample exonerate:est2genome mRNA 758 1357 . + . ID=mRNA_3;Parent=gene_3
a03dead1bede "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit a141c63903d1a598569985e400125d4e7de42801"
iuc
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diff changeset
12 sample exonerate:est2genome exon 758 1357 . + . ID=mRNA_3_exon_1;Parent=mRNA_3;deletions=4;identity=98.33;insertions=1;similarity=98.33
a03dead1bede "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit a141c63903d1a598569985e400125d4e7de42801"
iuc
parents:
diff changeset
13 sample exonerate:est2genome CDS 758 1357 . + 0 ID=mRNA_3_CDS;Parent=mRNA_3