Mercurial > repos > iuc > exonerate
diff test-data/protein2genome.gff @ 0:f48ed38dfddf draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exonerate commit e02d20338ee01ed58265d93e9cc5b0695a322d47
| author | iuc |
|---|---|
| date | Thu, 02 Aug 2018 09:11:30 -0400 |
| parents | |
| children | a03dead1bede |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/protein2genome.gff Thu Aug 02 09:11:30 2018 -0400 @@ -0,0 +1,22 @@ +# --- START OF GFF DUMP --- +# +# +##gff-version 2 +##source-version exonerate:protein2genome:local 2.4.0 +##date 2018-08-02 +##type DNA +# +# +# seqname source feature start end score strand frame attributes +# +sample exonerate:protein2genome:local gene 1181 2291 456 + . gene_id 1 ; sequence sample ; gene_orientation + ; identity 98.97 ; similarity 100.00 +sample exonerate:protein2genome:local cds 1181 1326 . + . +sample exonerate:protein2genome:local exon 1181 1326 . + . insertions 0 ; deletions 0 ; identity 100.00 ; similarity 100.00 +sample exonerate:protein2genome:local splice5 1327 1328 . + . intron_id 1 ; splice_site "CA" +sample exonerate:protein2genome:local intron 1327 2143 . + . intron_id 1 +sample exonerate:protein2genome:local splice3 2142 2143 . + . intron_id 0 ; splice_site "AT" +sample exonerate:protein2genome:local cds 2144 2291 . + . +sample exonerate:protein2genome:local exon 2144 2291 . + . insertions 0 ; deletions 0 ; identity 97.96 ; similarity 100.00 +sample exonerate:protein2genome:local similarity 1181 2291 456 + . alignment_id 1 ; Query sample ; Align 1181 1 144 ; Align 2145 50 147 +# --- END OF GFF DUMP --- +#