Mercurial > repos > iuc > extract_genomic_dna
comparison extract_genomic_dna_utils.py @ 11:80414c33a59a draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/extract_genomic_dna commit 6db2d98b513e4980788fcba49d809c91e5750296
| author | iuc |
|---|---|
| date | Thu, 21 Nov 2024 07:20:29 +0000 |
| parents | 3088e7e70888 |
| children |
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| 10:5cc8e93ee98f | 11:80414c33a59a |
|---|---|
| 176 feature_intervals.append(self.seed_interval) | 176 feature_intervals.append(self.seed_interval) |
| 177 while True: | 177 while True: |
| 178 try: | 178 try: |
| 179 interval = GenomicIntervalReader.next(self) | 179 interval = GenomicIntervalReader.next(self) |
| 180 raw_size += len(self.current_line) | 180 raw_size += len(self.current_line) |
| 181 except StopIteration as e: | 181 except StopIteration: |
| 182 # No more intervals to read, but last feature needs to be | 182 # No more intervals to read, but last feature needs to be |
| 183 # returned. | 183 # returned. |
| 184 interval = None | 184 interval = None |
| 185 raw_size += len(self.current_line) | 185 raw_size += len(self.current_line) |
| 186 break | 186 break |