Mercurial > repos > iuc > extract_genomic_dna

diff test-data/extract_genomic_dna_out1.fasta @ 0:8dd8e89c0603 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/extract_genomic_dna commit b'67cff25a50ba173b0468819204d0999496f68ea9'
author iuc
date Tue, 19 Jan 2016 09:34:23 -0500
parents
children 702970e4a134
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/extract_genomic_dna_out1.fasta	Tue Jan 19 09:34:23 2016 -0500
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+>hg17_chr1_147962192_147962580_-
+ACTTGATCCTGCTCCCTCGGTGTCTGCATTGACTCCTCATGCTGGGACTG
+GACCCGTCAACCCCCCTGCTCGCTGCTCACGTACCTTCATCACTTTTAGT
+GATGATGCAACTTTCGAGGAATGGTTCCCCCAAGGGCGGCCCCCAAAAGT
+CCCTGTTCGTGAGGTCTGTCCAGTGACCCATCGTCCAGCCCTATACCGGG
+ACCCTGTTACAGACATACCCTATGCCACTGCTCGAGCCTTCAAGATCATT
+CGTGAGGCTTACAAGAAGTACATTACTGCCCATGGACTGCCGCCCACTGC
+CTCAGCCCTGGGCCCCGGCCCGCCACCTCCTGAGCCCCTCCCTGGCTCTG
+GGCCCCGAGCCTTGCGCCAGAAAATTGTCATTAAATGA
+>hg17_chr1_147984545_147984630_+
+ATGGCGTCGGCCTCCTCCGGGCCGTCGTCTTCGGTCGGTTTTTCATCCTT
+TGATCCCGCGGTCCCTTCCTGTACCTTGTCCTCAG
+>hg17_chr1_148078400_148078582_-
+GTTCTCAGCTTCCTTGCTTCCATGGCTCCAGCACCATTCGAAACCTCAAA
+GAGAGGTTCCACATGAGCATGACTGAGGAGCAGCTGCAGCTGCTGGTGGA
+GCAGATGGTGGATGGCAGTATGCGGTCTATCACCACCAAACTCTATGACG
+GCTTCCAGTACCTCACCAACGGCATCATGTGA
+>hg17_chr1_148185136_148185276_+
+ATGGAAGCGTTTTTGGGGTCGCGGTCCGGACTTTGGGCGGGGGGTCCGGC
+CCCAGGACAGTTTTACCGCATTCCGTCCACTCCCGATTCCTTCATGGATC
+CGGCGTCTGCACTTTACAGAGGTCCAATCACGCGGACCCA
+>hg17_chr10_55251623_55253124_-
+TCTTTTCCTTCTCTACCATTTTCAACAAAGCAGGGGAAATAACTCAGTCT
+CAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCAATACT
+ATTGAGGCTCACAAGTCAGCTCATGTAGACGGATCACTTAAGAGCAACAA
+ACTGAAGTCTGCAAGAAAATTCACATTTCTATCTGATGAGGATGACTTAA
+GTGCCCATAATCCCCTTTATAAGGAAAACATAAGTCAAGTATCAACAAAT
+TCAGACATTTCACAGAGAACAGATTTTGTAGACCCATTTTCACCCAAAAT
+ACAAGCCAAGAGTAAGTCTCTGAGGGGCCCAAGAGAAAAGATTCAGAGGC
+TGTGGAGTCAGTCAGTCAGCTTACCCAGGAGGCTGATGAGGAAAGTTCCA
+AATAGACCAGAGATCATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAA
+AGCTGAAAATGAAAACACTGGAATCTGTACAAACAAAAGAGGTAGCAGCA
+ATCCATTGCTTACAACTGAAGAGGCAAATTTGACAGAGAAAGAGGAAATA
+AGGCAAGGTGAAACACTGATGATAGAAGGAACAGAACAGTTGAAATCTCT
+CTCTTCAGACTCTTCATTTTGCTTTCCCAGGCCTCACTTCTCATTCTCCA
+CTTTGCCAACTGTTTCAAGAACTGTGGAACTCAAATCAGAACCTAATGTC
+ATCAGTTCTCCTGCTGAGTGTTCCTTGGAACTTTCTCCTTCAAGGCCTTG
+TGTTTTACATTCTTCACTCTCTAGGAGAGAGACACCTATTTGTATGTTAC
+CTATTGAAACCGAAAGAAATATTTTTGAAAATTTTGCCCATCCACCAAAC
+ATCTCTCCTTCTGCCTGtccccttccccctcctcctcctatttctcctcc
+ttctcctcctcctgctcctgctcctcttgctcctcctcctgacatttctc
+ctttttctcttttttgtcctcctccctctcctccttctatccctcttcct
+cttcctcctcctACATTTTTTCCACTTTCCGTTTCAACGTCTGGTCCCCC
+AACAccacctcttctacctccatttccaactcctcttcctccaccacctc
+cttctattccttgccctccacctccttcAGCTTCATTTCTGTCCACAGAG
+TGTGTCTGTATAACAGGTGTTAAATGCACGACCAACTTGATGCCTGCCGA
+GAAAATTAAGTCCTCTATGACACAGCTATCAACAACGACAGTGTGTAAAA
+CAGACCCTCAGAGAGAACCAAAAGGCATCCTCAGACACGTTAAAAACTTA
+GCAGAACTTGAAAAATCAGTAGCTAACATGTACAGTCAAATAGAAAAAAA
+CTATCTACGCACAAATGTTTCAGAACTTCAAACTATGTGCCCTTCAGAAG
+TAACAAATATGGAAATCACATCTGAACAAAACAAGGGGAGTTTGAACAAT
+ATTGTCGAGGGAACTGAAAAACAATCTCACAGTCAATCTACTTCACTGTA
+A
+>hg17_chr11_116124407_116124501_-
+ATCCAATGGATTTGAACAGAAGCGCTTTGCCAGGCTTGCCAGCAAGAAGG
+CAGTGGAGGAACTTGCCTACAAATGGAGTGTTGAGGATATGTAA
+>hg17_chr11_116206508_116206563_+
+ATGCAGCCCCGGGTACTCCTTGTTGTTGCCCTCCTGGCGCTCCTGGCCTC
+TGCCC
+>hg17_chr11_116211733_116212337_-
+CCTAAAGCTCCTTGACAACTGGGACAGCGTGACCTCCACCTTCAGCAAGC
+TGCGCGAACAGCTCGGCCCTGTGACCCAGGAGTTCTGGGATAACCTGGAA
+AAGGAGACAGAGGGCCTGAGGCAGGAGATGAGCAAGGATCTGGAGGAGGT
+GAAGGCCAAGGTGCAGCCCTACCTGGACGACTTCCAGAAGAAGTGGCAGG
+AGGAGATGGAGCTCTACCGCCAGAAGGTGGAGCCGCTGCGCGCAGAGCTC
+CAAGAGGGCGCGCGCCAGAAGCTGCACGAGCTGCAAGAGAAGCTGAGCCC
+ACTGGGCGAGGAGATGCGCGACCGCGCGCGCGCCCATGTGGACGCGCTGC
+GCACGCATCTGGCCCCCTACAGCGACGAGCTGCGCCAGCGCTTGGCCGCG
+CGCCTTGAGGCTCTCAAGGAGAACGGCGGCGCCAGACTGGCCGAGTACCA
+CGCCAAGGCCACCGAGCATCTGAGCACGCTCAGCGAGAAGGCCAAGCCCG
+CGCTCGAGGACCTCCGCCAAGGCCTGCTGCCCGTGCTGGAGAGCTTCAAG
+GTCAGCTTCCTGAGCGCTCTCGAGGAGTACACTAAGAAGCTCAACACCCA
+GTGA
+>hg17_chr11_1812377_1812407_+
+ATGCTCCACCTGCATGGCTGGCAAACCATG
+>hg17_chr12_38440094_38440321_-
+GAGCTTTCTTCCTCTATGCTGGATTTGCTGCTGTGGGACTCCTTTTCATC
+TATGGCTGTCTTCCTGAGACCAAAGGCAAAAAATTAGAGGAAATTGAATC
+ACTCTTTGACAACAGGCTATGTACATGTGGCACTTCAGATTCTGATGAAG
+GGAGATATATTGAATATATTCGGGTAAAGGGAAGTAACTATCATCTTTCT
+GACAATGATGCTTCTGATGTGGAATAA
+>hg17_chr13_112381694_112381953_+
+ATGAACTCACCAGAGGCGAGGCTCTGCGTTGCTCAATGCAGAGACTCTTA
+CCCAGGGTGTCAGCCTCTGAAAGATACACGTGCCTGGGCCTCTTCCCTGA
+AGATGGACCCGGCAGGTCTGGAGGGAGGCCCCCGTGATGAATCCCGTGAT
+GAGCCGCCGATCCGAGCTCAGGCTGCGTCATGGGACCAGCCACAAGGTTG
+CCTGACCTATAAAGGTCGCAGGAGTGCCTCAGGGACACAGAAGCAGTTAC
+AGCTGCCAG