Mercurial > repos > iuc > extract_metaphlan_database
diff extract_metaphlan_database.xml @ 6:5eccd3d336a3 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/metaphlan/ commit 08ec37116aab4268fdb93f175b60e50a0bbfafb2
| author | iuc |
|---|---|
| date | Mon, 27 Feb 2023 07:00:39 +0000 |
| parents | 5b2f8b6a3609 |
| children |
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--- a/extract_metaphlan_database.xml Sat Dec 03 10:42:36 2022 +0000 +++ b/extract_metaphlan_database.xml Mon Feb 27 07:00:39 2023 +0000 @@ -20,14 +20,15 @@ ]]></command> <inputs> <param name="cached_db" label="Cached database with clade-specific marker genes" type="select"> - <options from_data_table="metaphlan_database"> - <validator message="No MetaPhlAn database is available" type="no_options" /> + <options from_data_table="@IDX_DATA_TABLE@"> + <filter type="static_value" column="4" value="@IDX_VERSION@"/> + <validator message="No MetaPhlAn database is available" type="no_options"/> </options> </param> </inputs> <outputs> - <data name="sequences" format="fasta" label="${tool.name} on ${on_string}: Marker seqeunces from MetaPhlAn database" /> - <data name="metadata" format="json" label="${tool.name} on ${on_string}: Marker metadata from MetaPhlAn database" /> + <data name="sequences" format="fasta" label="${tool.name} on ${on_string}: Marker seqeunces from MetaPhlAn database"/> + <data name="metadata" format="json" label="${tool.name} on ${on_string}: Marker metadata from MetaPhlAn database"/> </outputs> <tests> <test expect_num_outputs="2">