Mercurial > repos > iuc > fastp

diff macros.xml @ 0:988729b728f0 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastp commit 2e41f5d3dd8201a5f8295ec30095c508250a8304
author iuc
date Fri, 09 Mar 2018 20:21:51 -0500
parents
children f44e93b4529c
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/macros.xml	Fri Mar 09 20:21:51 2018 -0500
@@ -0,0 +1,25 @@
+<macros>
+    <token name="@WRAPPER_VERSION@">0.12.4</token>
+
+    <xml name="adapter_sequence1">
+        <param name="adapter_sequence1" argument="--adapter_sequence" type="text" optional="true" label="Adapter sequence for input 1"
+            help="The adapter for read1. For SE data, if not specified, the adapter will be auto-detected. For PE data, this is used if R1/R2 are found not overlapped.">
+            <sanitizer>
+                <valid>
+                    <add value="A"/>
+                    <add value="T"/>
+                    <add value="C"/>
+                    <add value="G"/>
+                </valid>
+            </sanitizer>
+        </param>
+    </xml>
+    <xml name="in1">
+        <param name="in1" argument="-i" type="data" format="fastq,fastq.gz" label="Input 1" help="Input FASTQ file #1"/>
+    </xml>
+    <xml name="poly_g_min_len">
+        <param name="poly_g_min_len" argument="--poly_g_min_len" type="integer" optional="true" label="PolyG minimum length"
+            help="The minimum length to detect polyG in the read tail. 10 by default."/>
+    </xml>
+
+</macros>