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changeset 8:1d8fe9bc4cb0 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/fastp commit 6e59980ea50d84a849190460ae44c055f643355f
author iuc
date Tue, 28 May 2019 10:18:59 -0400
parents 6c2351178f8d
children dbf9c561ef29
files fastp.xml
diffstat 1 files changed, 6 insertions(+), 6 deletions(-) [+]
line wrap: on
line diff
--- a/fastp.xml	Wed Jan 16 04:02:33 2019 -0500
+++ b/fastp.xml	Tue May 28 10:18:59 2019 -0400
@@ -1,4 +1,4 @@
-<tool id="fastp" name="fastp" version="@WRAPPER_VERSION@">
+<tool id="fastp" name="fastp" version="@WRAPPER_VERSION@+galaxy1">
     <description>- fast all-in-one preprocessing for FASTQ files</description>
     <macros>
         <import>macros.xml</import>
@@ -314,19 +314,19 @@
     </inputs>
 
     <outputs>
-        <data name="out1" format_source="in1" label="${tool.name} on ${on_string}: Read 1 Output">
+        <data name="out1" format_source="in1" label="${tool.name} on ${on_string}: Read 1 output">
             <filter>single_paired['single_paired_selector'] in ["single", "paired"]</filter>
         </data>
-        <data name="out2" format_source="in2" label="${tool.name} on ${on_string}: Read 2 Output">
+        <data name="out2" format_source="in2" label="${tool.name} on ${on_string}: Read 2 output">
             <filter>single_paired['single_paired_selector'] == "paired"</filter>
         </data>
-        <collection name="output_paired_coll" type="paired" structured_like="paired_input" inherit_format="true" label="Paired-end output of ${tool.name} on ${on_string}">
+        <collection name="output_paired_coll" type="paired" format_source="paired_input['forward']" label="${tool.name} on ${on_string}: Paired-end output">
             <filter>single_paired['single_paired_selector'] == "paired_collection"</filter>
         </collection>
-        <data name="report_html" format="html" from_work_dir="fastp.html" label="${tool.name} on ${on_string}: HTML Report">
+        <data name="report_html" format="html" from_work_dir="fastp.html" label="${tool.name} on ${on_string}: HTML report">
             <filter>output_options['report_html'] is True</filter>
         </data>
-        <data name="report_json" format="json" from_work_dir="fastp.json" label="${tool.name} on ${on_string}: JSON Report">
+        <data name="report_json" format="json" from_work_dir="fastp.json" label="${tool.name} on ${on_string}: JSON report">
             <filter>output_options['report_json'] is True</filter>
         </data>
     </outputs>