Mercurial > repos > iuc > find_nested_alt_orfs

comparison test-data/codon_freq_from_bicodon.tabular @ 0:14f4c7a8a962 draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/naltorfs/ commit cbedf7b5968b45a08df88d4ad799951d6f50a2bd"
author iuc
date Mon, 11 Apr 2022 20:37:19 +0000
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-1:000000000000 0:14f4c7a8a962
1 #frame codon_count aaa aac aag aat aca acc acg act aga agc agg agt ata atc atg att caa cac cag cat cca ccc ccg cct cga cgc cgg cgt cta ctc ctg ctt gaa gac gag gat gca gcc gcg gct gga ggc ggg ggt gta gtc gtg gtt taa tac tag tat tca tcc tcg tct tga tgc tgg tgt tta ttc ttg ttt
2 2-counts 855 4 12 14 8 13 23 8 15 28 18 25 12 8 27 31 7 3 11 17 4 23 28 16 14 4 12 2 1 10 16 35 7 4 7 16 4 16 38 6 14 15 15 18 4 4 11 25 4 1 12 3 3 18 15 7 16 16 17 26 10 8 20 19 7
3 2-percent 855 0.4678362573099415500088582576 1.4035087719298244834931210789 1.6374269005847954527865795171 0.9356725146198831000177165151 1.5204678362573098571175478355 2.6900584795321638154064203263 0.9356725146198831000177165151 1.7543859649122806043664013487 3.2748538011695909055731590342 2.1052631578947367252396816184 2.9239766081871341185660639894 1.4035087719298244834931210789 0.9356725146198831000177165151 3.1578947368421053099041273526 3.6257309941520468044018343790 0.8187134502923977263932897586 0.3508771929824561208732802697 1.2865497076023393319132992474 1.9883040935672515736598597869 0.4678362573099415500088582576 2.6900584795321638154064203263 3.2748538011695909055731590342 1.8713450292397662000354330303 1.6374269005847954527865795171 0.4678362573099415500088582576 1.4035087719298244834931210789 0.2339181286549707750044291288 0.1169590643274853875022145644 1.1695906432748537362442675658 1.8713450292397662000354330303 4.0935672514619882988995414053 0.8187134502923977263932897586 0.4678362573099415500088582576 0.8187134502923977263932897586 1.8713450292397662000354330303 0.4678362573099415500088582576 1.8713450292397662000354330303 4.4444444444444446418174266000 0.7017543859649122417465605395 1.6374269005847954527865795171 1.7543859649122806043664013487 1.7543859649122806043664013487 2.1052631578947367252396816184 0.4678362573099415500088582576 0.4678362573099415500088582576 1.2865497076023393319132992474 2.9239766081871341185660639894 0.4678362573099415500088582576 0.1169590643274853875022145644 1.4035087719298244834931210789 0.3508771929824561208732802697 0.3508771929824561208732802697 2.1052631578947367252396816184 1.7543859649122806043664013487 0.8187134502923977263932897586 1.8713450292397662000354330303 1.8713450292397662000354330303 1.9883040935672515736598597869 3.0409356725146197142350956710 1.1695906432748537362442675658 0.9356725146198831000177165151 2.3391812865497074724885351316 2.2222222222222223209087133000 0.8187134502923977263932897586
4 3-counts 855 3 2 3 4 12 10 10 10 17 12 16 5 2 7 7 3 23 10 19 18 37 23 19 25 7 16 10 4 8 14 19 18 27 10 14 12 23 12 8 19 31 18 11 11 3 7 8 9 11 6 4 9 22 15 17 20 27 36 28 19 1 5 9 10
5 3-percent 855 0.3508771929824561208732802697 0.2339181286549707750044291288 0.3508771929824561208732802697 0.4678362573099415500088582576 1.4035087719298244834931210789 1.1695906432748537362442675658 1.1695906432748537362442675658 1.1695906432748537362442675658 1.9883040935672515736598597869 1.4035087719298244834931210789 1.8713450292397662000354330303 0.5847953216374268681221337829 0.2339181286549707750044291288 0.8187134502923977263932897586 0.8187134502923977263932897586 0.3508771929824561208732802697 2.6900584795321638154064203263 1.1695906432748537362442675658 2.2222222222222223209087133000 2.1052631578947367252396816184 4.3274853801169594902376047685 2.6900584795321638154064203263 2.2222222222222223209087133000 2.9239766081871341185660639894 0.8187134502923977263932897586 1.8713450292397662000354330303 1.1695906432748537362442675658 0.4678362573099415500088582576 0.9356725146198831000177165151 1.6374269005847954527865795171 2.2222222222222223209087133000 2.1052631578947367252396816184 3.1578947368421053099041273526 1.1695906432748537362442675658 1.6374269005847954527865795171 1.4035087719298244834931210789 2.6900584795321638154064203263 1.4035087719298244834931210789 0.9356725146198831000177165151 2.2222222222222223209087133000 3.6257309941520468044018343790 2.1052631578947367252396816184 1.2865497076023393319132992474 1.2865497076023393319132992474 0.3508771929824561208732802697 0.8187134502923977263932897586 0.9356725146198831000177165151 1.0526315789473683626198408092 1.2865497076023393319132992474 0.7017543859649122417465605395 0.4678362573099415500088582576 1.0526315789473683626198408092 2.5730994152046786638265984948 1.7543859649122806043664013487 1.9883040935672515736598597869 2.3391812865497074724885351316 3.1578947368421053099041273526 4.2105263157894734504793632368 3.2748538011695909055731590342 2.2222222222222223209087133000 0.1169590643274853875022145644 0.5847953216374268681221337829 1.0526315789473683626198408092 1.1695906432748537362442675658