Mercurial > repos > iuc > freyja_demix
diff freyja_demix.xml @ 1:c0a0e79d7196 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/freyja commit 26266f43c51f3f711ecd3a7dc6aea581a3b57fc5
author | iuc |
---|---|
date | Fri, 07 Jul 2023 05:51:15 +0000 |
parents | fc6252e78d5b |
children |
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--- a/freyja_demix.xml Thu Jul 28 09:26:02 2022 +0000 +++ b/freyja_demix.xml Fri Jul 07 05:51:15 2023 +0000 @@ -30,6 +30,7 @@ --meta '$meta' #end if $confirmedonly + $wgisaid @CUSTOM_BARCODES_COMMAND@ --covcut $depth_cutoff --output abundances_raw.tsv && @@ -73,9 +74,10 @@ <param name="source" value="manual"/> <param name="name" value="samplename"/> </conditional> - <output name="abundances" ftype="tabular"> + <output name="abundances"> <assert_contents> - <has_text text="samplename"/> + <has_n_columns n="2" /> + <has_text text="AY.48"/> </assert_contents> </output> </test> @@ -89,9 +91,10 @@ <conditional name="sample_name"> <param name="source" value="auto"/> </conditional> - <output name="abundances" ftype="tabular"> + <output name="abundances"> <assert_contents> - <has_text text="summarized"/> + <has_n_columns n="2" /> + <has_text text="AY.48"/> </assert_contents> </output> </test>