Mercurial > repos > iuc > funannotate_annotate
comparison test-data/funannotate_db/Pfam-A.clans.tsv @ 0:a5baa4ff168d draft
"planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
| author | iuc |
|---|---|
| date | Mon, 04 Oct 2021 19:39:38 +0000 |
| parents | |
| children |
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| -1:000000000000 | 0:a5baa4ff168d |
|---|---|
| 1 PF00001 CL0192 GPCR_A 7tm_1 7 transmembrane receptor (rhodopsin family) | |
| 2 PF00002 CL0192 GPCR_A 7tm_2 7 transmembrane receptor (Secretin family) | |
| 3 PF00003 CL0192 GPCR_A 7tm_3 7 transmembrane sweet-taste receptor of 3 GCPR | |
| 4 PF00004 CL0023 P-loop_NTPase AAA ATPase family associated with various cellular activities (AAA) | |
| 5 PF00005 CL0023 P-loop_NTPase ABC_tran ABC transporter | |
| 6 PF00006 CL0023 P-loop_NTPase ATP-synt_ab ATP synthase alpha/beta family, nucleotide-binding domain | |
| 7 PF00007 CL0079 Cystine-knot Cys_knot Cystine-knot domain | |
| 8 PF00008 CL0001 EGF EGF EGF-like domain | |
| 9 PF00009 CL0023 P-loop_NTPase GTP_EFTU Elongation factor Tu GTP binding domain | |
| 10 PF00010 HLH Helix-loop-helix DNA-binding domain | |
| 11 PF00011 CL0190 HSP20 HSP20 Hsp20/alpha crystallin family | |
| 12 PF00012 CL0108 Actin_ATPase HSP70 Hsp70 protein | |
| 13 PF00013 CL0007 KH KH_1 KH domain | |
| 14 PF00014 Kunitz_BPTI Kunitz/Bovine pancreatic trypsin inhibitor domain | |
| 15 PF00015 MCPsignal Methyl-accepting chemotaxis protein (MCP) signalling domain | |
| 16 PF00016 RuBisCO_large Ribulose bisphosphate carboxylase large chain, catalytic domain | |
| 17 PF00017 CL0541 SH2-like SH2 SH2 domain | |
| 18 PF00018 CL0010 SH3 SH3_1 SH3 domain | |
| 19 PF00019 CL0079 Cystine-knot TGF_beta Transforming growth factor beta like domain | |
| 20 PF00020 CL0607 TNF_receptor TNFR_c6 TNFR/NGFR cysteine-rich region | |
| 21 PF00021 CL0117 uPAR_Ly6_toxin UPAR_LY6 u-PAR/Ly-6 domain | |
| 22 PF00022 CL0108 Actin_ATPase Actin Actin | |
| 23 PF00023 CL0465 Ank Ank Ankyrin repeat | |
| 24 PF00024 CL0168 PAN PAN_1 PAN domain | |
| 25 PF00025 CL0023 P-loop_NTPase Arf ADP-ribosylation factor family | |
| 26 PF00026 CL0129 Peptidase_AA Asp Eukaryotic aspartyl protease | |
| 27 PF00027 CL0029 Cupin cNMP_binding Cyclic nucleotide-binding domain | |
| 28 PF00028 CL0159 E-set Cadherin Cadherin domain | |
| 29 PF00029 CL0375 Transporter Connexin Connexin | |
| 30 PF00030 CL0333 gCrystallin Crystall Beta/Gamma crystallin | |
| 31 PF00031 CL0121 Cystatin Cystatin Cystatin domain |