diff funannotate_annotate.xml @ 12:732927f5b015 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/funannotate commit 8341270dd36185ebf59d15282bc79f1215e936a4
author iuc
date Fri, 07 Mar 2025 22:35:55 +0000
parents 9c15ca7e764e
children
line wrap: on
line diff
--- a/funannotate_annotate.xml	Wed Jun 26 09:41:52 2024 +0000
+++ b/funannotate_annotate.xml	Fri Mar 07 22:35:55 2025 +0000
@@ -11,9 +11,10 @@
     <command><![CDATA[
 ## Needed by some subprocess invoked internally
 ## https://github.com/nextgenusfs/funannotate/issues/905
-export FUNANNOTATE_DB='$database.fields.path'
+export FUNANNOTATE_DB='$database.fields.path' &&
 
-&&
+## show detailed info about the reference DB on stdout
+funannotate database &&
 
 funannotate annotate
 
@@ -106,7 +107,7 @@
                 <column name="value" index="0" />
                 <column name="name" index="1" />
                 <column name="path" index="3" />
-                <filter type="sort_by" column="0" />
+                <filter type="sort_by" column="0" reverse_sort_order="true"/>
                 <filter type="static_value" column="2" value="1.0" />
             </options>
         </param>