diff test-data/funannotate_db/insecta/prfl/EOG090W0MBV.prfl @ 5:9feee7fc49a1 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/funannotate commit 2589d2785ca90160a22a5fe14e03311e189ea51d
author iuc
date Thu, 13 Apr 2023 17:13:04 +0000
parents
children
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/funannotate_db/insecta/prfl/EOG090W0MBV.prfl	Thu Apr 13 17:13:04 2023 +0000
@@ -0,0 +1,181 @@
+[name]
+unknown
+
+[dist]
+# distance from previous block
+# <min> <max>
+0	7
+
+[block]
+# block no. 0 follows, 35 sequences, length 10
+# corresponding to MSA columns:
+# 7-16
+name=unknown_A
+#
+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>
+#	G	D	E	R	K	N	Q	S	T	A	V	L	I	F	Y	W	H	M	C	P
+0	0.02359	0.19577	0.01918	0.01164	0.01632	0.03856	0.01007	0.07779	0.01745	0.42598	0.02068	0.02254	0.01514	0.00808	0.00602	0.00189	0.00609	0.06745	0.00618	0.00960
+1	0.01775	0.66813	0.07291	0.01131	0.01692	0.02308	0.01145	0.02013	0.01339	0.08060	0.01043	0.01139	0.00882	0.00568	0.00439	0.00145	0.00681	0.00374	0.00317	0.00845
+2	0.14091	0.35037	0.26236	0.01289	0.01934	0.01867	0.01426	0.02031	0.01318	0.08020	0.01104	0.01222	0.00855	0.00590	0.00489	0.00172	0.00723	0.00408	0.00332	0.00858
+3	0.01482	0.36147	0.37657	0.01646	0.07589	0.01933	0.01759	0.01956	0.01325	0.01786	0.01029	0.01215	0.00823	0.00573	0.00518	0.00171	0.00809	0.00419	0.00273	0.00888
+4	0.07353	0.00686	0.00825	0.00817	0.00888	0.00741	0.00551	0.01070	0.00969	0.01443	0.01806	0.03327	0.01927	0.46201	0.28058	0.00723	0.00983	0.00792	0.00370	0.00472
+5	0.01615	0.63838	0.16866	0.01223	0.01841	0.02313	0.01325	0.01920	0.01299	0.01591	0.00931	0.01079	0.00812	0.00554	0.00444	0.00148	0.00728	0.00364	0.00271	0.00838
+6	0.28659	0.04777	0.04361	0.01184	0.01587	0.18001	0.00983	0.02236	0.06765	0.11491	0.03453	0.01465	0.01120	0.00685	0.00592	0.00184	0.04358	0.00466	0.00440	0.07192
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+9	0.08097	0.00754	0.00928	0.00848	0.01061	0.00706	0.00645	0.01429	0.01660	0.09376	0.50524	0.10529	0.04697	0.01208	0.00699	0.00199	0.00353	0.01050	0.00655	0.04580
+
+[dist]
+# distance from previous block
+# <min> <max>
+0	3
+
+[block]
+# block no. 1 follows, 35 sequences, length 6
+# corresponding to MSA columns:
+# 20-25
+name=unknown_B
+#
+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>
+#	G	D	E	R	K	N	Q	S	T	A	V	L	I	F	Y	W	H	M	C	P
+0	0.08074	0.57984	0.10591	0.01146	0.01715	0.02190	0.01177	0.02002	0.01319	0.07374	0.01037	0.01143	0.00862	0.00572	0.00445	0.00152	0.00680	0.00377	0.00321	0.00838
+1	0.01490	0.53226	0.12754	0.01173	0.01691	0.02045	0.01205	0.01771	0.01246	0.01560	0.01070	0.01338	0.00957	0.01340	0.14428	0.00310	0.00905	0.00421	0.00284	0.00785
+2	0.01062	0.15131	0.01283	0.00864	0.01000	0.01023	0.00639	0.01169	0.01020	0.01352	0.01700	0.03065	0.01810	0.41286	0.24385	0.00647	0.00954	0.00740	0.00350	0.00520
+3	0.01793	0.67280	0.03105	0.01164	0.01676	0.12969	0.01106	0.01991	0.01362	0.01501	0.00896	0.01036	0.00815	0.00559	0.00431	0.00140	0.00745	0.00349	0.00279	0.00803
+4	0.01482	0.57086	0.09009	0.01066	0.01581	0.02050	0.01082	0.01724	0.01323	0.01579	0.01942	0.01998	0.14412	0.00747	0.00488	0.00156	0.00634	0.00538	0.00331	0.00773
+5	0.01332	0.12525	0.09355	0.00978	0.01335	0.01020	0.00895	0.01635	0.01618	0.13131	0.33326	0.03633	0.14596	0.01079	0.00665	0.00192	0.00466	0.00905	0.00584	0.00731
+
+[dist]
+# distance from previous block
+# <min> <max>
+9	12
+
+[block]
+# block no. 2 follows, 35 sequences, length 13
+# corresponding to MSA columns:
+# 42-54
+name=unknown_C
+#
+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>
+#	G	D	E	R	K	N	Q	S	T	A	V	L	I	F	Y	W	H	M	C	P
+0	0.01426	0.01482	0.02773	0.01992	0.02579	0.01338	0.42471	0.01851	0.01409	0.02024	0.01207	0.01552	0.00949	0.00534	0.00700	0.00172	0.03930	0.00603	0.00339	0.30669
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+5	0.01451	0.44623	0.22966	0.01260	0.01839	0.01933	0.01370	0.01796	0.01255	0.01621	0.01102	0.01439	0.00976	0.05414	0.08304	0.00272	0.00853	0.00444	0.00284	0.00799
+6	0.02376	0.02768	0.01772	0.01587	0.01916	0.64971	0.01204	0.02546	0.01766	0.08587	0.01122	0.01252	0.00891	0.00685	0.00640	0.00171	0.04174	0.00437	0.00369	0.00767
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+9	0.00891	0.00664	0.00738	0.00743	0.00935	0.00578	0.00550	0.01079	0.01360	0.01838	0.04389	0.22018	0.35513	0.01455	0.00693	0.00206	0.00354	0.04136	0.13470	0.08392
+10	0.08687	0.00660	0.00769	0.00827	0.00959	0.00631	0.00597	0.01058	0.01363	0.01935	0.16354	0.39632	0.18054	0.01642	0.00749	0.00234	0.00367	0.04339	0.00589	0.00554
+11	0.04074	0.01386	0.01805	0.01416	0.01876	0.07069	0.11339	0.09311	0.07381	0.34991	0.05093	0.02267	0.01651	0.00796	0.00655	0.00199	0.00667	0.03972	0.00620	0.03432
+12	0.01734	0.01081	0.01377	0.01058	0.01514	0.00925	0.03086	0.05393	0.01572	0.23377	0.05241	0.05214	0.08502	0.00801	0.00629	0.00160	0.02405	0.00662	0.00548	0.34721
+
+[dist]
+# distance from previous block
+# <min> <max>
+2	5
+
+[block]
+# block no. 3 follows, 35 sequences, length 86
+# corresponding to MSA columns:
+# 60-145
+name=unknown_D
+#
+# <colnr> <probs for GDERKNQSTAVLIFYWHMCP>
+#	G	D	E	R	K	N	Q	S	T	A	V	L	I	F	Y	W	H	M	C	P
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+1	0.53577	0.01336	0.01307	0.08696	0.04167	0.03788	0.02918	0.07288	0.03260	0.04628	0.01079	0.01252	0.00821	0.00616	0.00475	0.00194	0.00590	0.00423	0.00410	0.03174
+2	0.76028	0.01228	0.00972	0.00864	0.01258	0.01415	0.00709	0.01972	0.04330	0.05104	0.01011	0.01127	0.00771	0.00607	0.00412	0.00197	0.00493	0.00370	0.00416	0.00714
+3	0.72651	0.01293	0.01049	0.00909	0.01315	0.01488	0.00749	0.10204	0.01307	0.02984	0.00960	0.01089	0.00734	0.00610	0.00422	0.00196	0.00516	0.00371	0.00422	0.00734
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+5	0.01436	0.03852	0.08049	0.01712	0.02321	0.01246	0.29347	0.01852	0.01421	0.04485	0.03354	0.01597	0.01104	0.00544	0.00604	0.00158	0.00751	0.00564	0.00365	0.35236
+6	0.01548	0.01493	0.02577	0.07778	0.67685	0.01505	0.04203	0.01932	0.01437	0.02047	0.01193	0.01581	0.00995	0.00568	0.00632	0.00190	0.00769	0.00571	0.00312	0.00984
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+
+[dist]
+# distance from previous block
+# <min> <max>
+0	1
+
+# created by:
+# /home/cegg/simao/soft/augustus-3.2.1/scripts/msa2prfl.pl ./align_prep/EOG090W0MBV.fa