Mercurial > repos > iuc > funannotate_predict
annotate README.md @ 13:3e13e35ef26b draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/funannotate commit 8341270dd36185ebf59d15282bc79f1215e936a4
| author | iuc |
|---|---|
| date | Fri, 07 Mar 2025 22:35:08 +0000 |
| parents | 40b87aef5241 |
| children |
| rev | line source |
|---|---|
|
0
40b87aef5241
"planemo upload commit 9613152729099079c7465c3d5d42005ef22ca91e"
iuc
parents:
diff
changeset
|
1 # Funannotate |
|
40b87aef5241
"planemo upload commit 9613152729099079c7465c3d5d42005ef22ca91e"
iuc
parents:
diff
changeset
|
2 |
|
40b87aef5241
"planemo upload commit 9613152729099079c7465c3d5d42005ef22ca91e"
iuc
parents:
diff
changeset
|
3 Funannotate can use GeneMark to predict gene, but due to licensing issues, we are not allowed to distribute GeneMark automatically. |
|
40b87aef5241
"planemo upload commit 9613152729099079c7465c3d5d42005ef22ca91e"
iuc
parents:
diff
changeset
|
4 |
|
40b87aef5241
"planemo upload commit 9613152729099079c7465c3d5d42005ef22ca91e"
iuc
parents:
diff
changeset
|
5 If you want to use it, the Galaxy administrator needs to install it GeneMark following the instructions on https://github.com/nextgenusfs/funannotate, and set the `GENEMARK_PATH` variable on the job destination. |
