Mercurial > repos > iuc > funannotate_sort
diff test-data/funannotate_db/insecta/prfl/EOG090W04UC.prfl @ 5:2b7d3bfd40d8 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/funannotate commit 2589d2785ca90160a22a5fe14e03311e189ea51d
| author | iuc |
|---|---|
| date | Thu, 13 Apr 2023 17:14:49 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/funannotate_db/insecta/prfl/EOG090W04UC.prfl Thu Apr 13 17:14:49 2023 +0000 @@ -0,0 +1,491 @@ +[name] +unknown + +[dist] +# distance from previous block +# <min> <max> +0 186 + +[block] +# block no. 0 follows, 39 sequences, length 75 +# corresponding to MSA columns: +# 186-260 +name=unknown_A +# +# <colnr> <probs for GDERKNQSTAVLIFYWHMCP> +# G D E R K N Q S T A V L I F Y W H M C P +0 0.00837 0.00604 0.00790 0.00744 0.00883 0.00558 0.00558 0.01116 0.01674 0.02371 0.75216 0.04417 0.05580 0.01209 0.00697 0.00186 0.00279 0.01069 0.00651 0.00558 +1 0.02139 0.01412 0.01577 0.01231 0.01646 0.01518 0.01000 0.52412 0.02357 0.15588 0.01618 0.01765 0.01199 0.07475 0.04069 0.00245 0.00659 0.00575 0.00584 0.00931 +2 0.00845 0.00634 0.00950 0.00950 0.01056 0.00739 0.00739 0.01056 0.00950 0.01373 0.01584 0.02323 0.01478 0.04435 0.76873 0.00950 0.01584 0.00634 0.00317 0.00528 +3 0.01052 0.00620 0.00723 0.00689 0.00737 0.00605 0.00413 0.01076 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0.00549 0.00823 0.01132 0.01510 0.03259 0.78831 0.03911 0.01853 0.00755 0.00240 0.00343 0.01681 0.00549 0.00480 +10 0.01237 0.12982 0.66678 0.01598 0.02424 0.01499 0.02033 0.01860 0.01242 0.01810 0.01030 0.01210 0.00750 0.00555 0.00538 0.00179 0.00843 0.00421 0.00250 0.00859 +11 0.01987 0.00905 0.01184 0.01004 0.01331 0.00838 0.00788 0.02351 0.10418 0.46438 0.04332 0.19279 0.02144 0.01039 0.00681 0.02458 0.00458 0.00856 0.00660 0.00848 +12 0.00699 0.00599 0.00599 0.00599 0.00799 0.00499 0.00449 0.00849 0.01348 0.01598 0.05991 0.05691 0.75288 0.01498 0.00699 0.00200 0.00300 0.01248 0.00549 0.00499 +13 0.01318 0.01116 0.01202 0.01091 0.01382 0.01257 0.00844 0.02661 0.57553 0.02418 0.16398 0.02773 0.05609 0.00909 0.00624 0.00198 0.00425 0.00769 0.00609 0.00846 +14 0.01356 0.01310 0.02275 0.25807 0.49951 0.01383 0.05860 0.01728 0.01300 0.01804 0.01099 0.01505 0.00890 0.00545 0.00594 0.00183 0.00745 0.00536 0.00284 0.00845 +15 0.01266 0.01123 0.01571 0.01368 0.01411 0.01503 0.01120 0.01407 0.00953 0.05482 0.01064 0.01666 0.01017 0.06453 0.14473 0.00390 0.56242 0.00562 0.00301 0.00629 +16 0.00909 0.00680 0.00853 0.00796 0.00958 0.00662 0.00601 0.01346 0.09934 0.02383 0.66953 0.04167 0.05152 0.01163 0.00687 0.00188 0.00300 0.01024 0.00645 0.00601 +17 0.00896 0.00611 0.00840 0.00840 0.00939 0.00685 0.00634 0.01095 0.00995 0.01505 0.01682 0.02477 0.01562 0.12253 0.53902 0.00753 0.01220 0.00644 0.15955 0.00513 +18 0.01494 0.62741 0.19169 0.01160 0.01747 0.02127 0.01270 0.01793 0.01212 0.01497 0.00875 0.01015 0.00757 0.00518 0.00420 0.00140 0.00686 0.00343 0.00252 0.00784 +19 0.02085 0.02636 0.01587 0.01448 0.01744 0.70577 0.01086 0.02237 0.01649 0.01460 0.01331 0.01446 0.06879 0.00682 0.00547 0.00156 0.01004 0.00452 0.00325 0.00670 +20 0.00721 0.00515 0.00686 0.00823 0.00858 0.00480 0.00549 0.00823 0.01132 0.01510 0.03259 0.78831 0.03911 0.01853 0.00755 0.00240 0.00343 0.01681 0.00549 0.00480 +21 0.01434 0.01375 0.02347 0.09977 0.69412 0.01397 0.01800 0.01789 0.01333 0.01896 0.01107 0.01473 0.00924 0.00532 0.00586 0.00177 0.00710 0.00527 0.00290 0.00913 +22 0.00934 0.00667 0.00931 0.01067 0.01195 0.00664 0.00920 0.01192 0.01343 0.01748 0.03142 0.12615 0.03445 0.01652 0.00812 0.00270 0.00528 0.65792 0.00545 0.00539 +23 0.00905 0.00566 0.00620 0.00632 0.00771 0.00529 0.00464 0.01125 0.01320 0.01980 0.14662 0.14295 0.21070 0.01139 0.00578 0.00175 0.00292 0.00968 0.37378 0.00529 +24 0.01408 0.01776 0.13376 0.02335 0.02966 0.01458 0.61242 0.01924 0.01385 0.04325 0.01215 0.01561 0.00896 0.00515 0.00676 0.00197 0.00964 0.00659 0.00307 0.00815 +25 0.01446 0.01508 0.01792 0.01542 0.01598 0.11749 0.01268 0.03918 0.01069 0.01502 0.00816 0.01268 0.00782 0.00968 0.01710 0.00242 0.65381 0.00500 0.00276 0.00664 +26 0.02285 0.01597 0.01738 0.01333 0.01804 0.01746 0.01101 0.67109 0.02681 0.10314 0.01503 0.01474 0.01048 0.00712 0.00592 0.00178 0.00637 0.00538 0.00604 0.01006 +27 0.01226 0.01051 0.01226 0.00876 0.01401 0.00788 0.00701 0.01489 0.01226 0.01927 0.01051 0.01226 0.00876 0.00438 0.00438 0.00088 0.00438 0.00350 0.00350 0.82832 +28 0.02299 0.01575 0.01724 0.01322 0.01793 0.01713 0.01092 0.64673 0.02644 0.12803 0.01535 0.01494 0.01063 0.00713 0.00592 0.00178 0.00632 0.00540 0.00609 0.01006 +29 0.00998 0.00640 0.00842 0.00771 0.00939 0.00586 0.00586 0.01272 0.01676 0.08881 0.68767 0.04205 0.05216 0.01167 0.00688 0.00186 0.00299 0.01027 0.00658 0.00598 +30 0.01377 0.01725 0.09919 0.02421 0.03044 0.01485 0.67080 0.01892 0.01383 0.01892 0.01184 0.01565 0.00884 0.00504 0.00686 0.00198 0.00986 0.00675 0.00295 0.00804 +31 0.01005 0.07657 0.01131 0.01064 0.01228 0.00823 0.00934 0.01259 0.01327 0.01711 0.02876 0.06052 0.03119 0.04643 0.00866 0.00271 0.00553 0.62412 0.00511 0.00556 +32 0.01301 0.08198 0.02209 0.01678 0.04937 0.03699 0.25573 0.03447 0.04633 0.01780 0.07405 0.04441 0.03282 0.08029 0.01077 0.00237 0.13473 0.03537 0.00366 0.00697 +33 0.01515 0.52325 0.02830 0.08042 0.01934 0.02078 0.09069 0.04600 0.01252 0.01554 0.00903 0.01132 0.00789 0.00579 0.00613 0.00157 0.09196 0.00408 0.00273 0.00752 +34 0.00849 0.00637 0.00734 0.00708 0.00877 0.00592 0.00531 0.01164 0.06046 0.02069 0.38062 0.06663 0.29167 0.01256 0.00669 0.00189 0.00299 0.01078 0.07852 0.00558 +35 0.01180 0.01011 0.01171 0.00851 0.01348 0.00763 0.00678 0.01432 0.01237 0.01898 0.01488 0.01621 0.07460 0.00532 0.00461 0.00098 0.00426 0.00430 0.00368 0.75547 +36 0.29076 0.01413 0.14454 0.01110 0.05646 0.03162 0.00974 0.01694 0.01203 0.04234 0.03286 0.01425 0.01031 0.00579 0.00454 0.00158 0.00525 0.00427 0.13986 0.15161 +37 0.01665 0.70154 0.02887 0.01011 0.01513 0.02161 0.00989 0.01860 0.01246 0.08004 0.00963 0.01052 0.00825 0.00524 0.00400 0.00130 0.00615 0.00342 0.00298 0.03359 +38 0.09003 0.00917 0.03221 0.00940 0.01246 0.00818 0.00759 0.02002 0.03418 0.36094 0.08530 0.10671 0.03733 0.10991 0.00923 0.00245 0.00480 0.04659 0.00594 0.00756 +39 0.00954 0.07944 0.00983 0.00844 0.00969 0.07426 0.00606 0.01073 0.01213 0.01512 0.07600 0.40495 0.12617 0.11829 0.00990 0.00258 0.00454 0.01236 0.00482 0.00515 +40 0.01312 0.11273 0.05804 0.01036 0.01498 0.01044 0.04599 0.01634 0.03600 0.07184 0.05632 0.04934 0.04618 0.00692 0.00524 0.00140 0.00510 0.04129 0.00407 0.39427 +41 0.01310 0.13956 0.23658 0.01220 0.01724 0.01293 0.02748 0.08717 0.02785 0.01882 0.01359 0.02035 0.01221 0.07697 0.00857 0.04732 0.00657 0.07443 0.00348 0.14358 +42 0.01333 0.19786 0.37946 0.01446 0.02065 0.05658 0.05206 0.03597 0.03294 0.01767 0.02516 0.01522 0.01021 0.00943 0.07290 0.00242 0.00863 0.02417 0.00296 0.00793 + +[dist] +# distance from previous block +# <min> <max> +0 7 + +[block] +# block no. 3 follows, 39 sequences, length 10 +# corresponding to MSA columns: +# 583-592 +name=unknown_D +# +# <colnr> <probs for GDERKNQSTAVLIFYWHMCP> +# G D E R K N Q S T A V L I F Y W H M C P +0 0.01399 0.03921 0.10945 0.02266 0.29134 0.01327 0.10552 0.01897 0.08924 0.05801 0.01594 0.05688 0.04171 0.00697 0.00672 0.00186 0.04887 0.00629 0.00367 0.04942 +1 0.01312 0.19967 0.29935 0.01409 0.05109 0.01428 0.05006 0.01732 0.01243 0.01782 0.01012 0.01199 0.00805 0.00507 0.00490 0.00143 0.00686 0.00400 0.00285 0.25551 +2 0.01417 0.20082 0.48518 0.01587 0.05814 0.05105 0.01782 0.01925 0.01287 0.05782 0.01072 0.01225 0.00800 0.00559 0.00522 0.00171 0.00800 0.00420 0.00281 0.00850 +3 0.14239 0.06385 0.09078 0.01097 0.03531 0.01161 0.00947 0.06146 0.07498 0.08361 0.01359 0.05245 0.01109 0.00618 0.00492 0.00148 0.00522 0.00483 0.00412 0.31169 +4 0.01657 0.55927 0.02612 0.01118 0.01567 0.13306 0.01020 0.02073 0.12694 0.01568 0.01083 0.01162 0.00922 0.00568 0.00437 0.00142 0.00671 0.00381 0.00315 0.00776 +5 0.01314 0.01048 0.01235 0.00887 0.01408 0.00793 0.00711 0.01575 0.01255 0.06473 0.01130 0.01275 0.00912 0.00456 0.00448 0.00093 0.00442 0.00365 0.00374 0.77806 +6 0.01495 0.61286 0.08577 0.01044 0.01582 0.02022 0.01056 0.01735 0.01209 0.01513 0.00877 0.01016 0.00776 0.00500 0.00403 0.00125 0.00621 0.00331 0.00268 0.13564 +7 0.01498 0.00887 0.01094 0.00926 0.01201 0.00863 0.00730 0.12172 0.05670 0.19832 0.41509 0.03337 0.05768 0.01011 0.00653 0.00185 0.00396 0.00864 0.00656 0.00747 +8 0.01134 0.01051 0.01688 0.65803 0.03657 0.01232 0.01496 0.01508 0.01189 0.01576 0.01051 0.01522 0.00802 0.00567 0.00567 0.00180 0.00734 0.00498 0.00276 0.13469 +9 0.01228 0.00858 0.01222 0.01067 0.01346 0.00801 0.08378 0.01541 0.04654 0.13383 0.09821 0.04324 0.23075 0.01184 0.00722 0.00209 0.02290 0.18362 0.00544 0.04993 + +[dist] +# distance from previous block +# <min> <max> +0 1 + +[block] +# block no. 4 follows, 39 sequences, length 21 +# corresponding to MSA columns: +# 594-614 +name=unknown_E +# +# <colnr> <probs for GDERKNQSTAVLIFYWHMCP> +# G D E R K N Q S T A V L I F Y W H M C P +0 0.01386 0.04719 0.04956 0.02101 0.04969 0.01413 0.49127 0.01898 0.05735 0.03678 0.05888 0.01747 0.01245 0.00579 0.00683 0.00189 0.02742 0.00662 0.00348 0.05935 +1 0.01594 0.08285 0.15448 0.08086 0.02287 0.01293 0.21191 0.03551 0.02797 0.18848 0.01684 0.04818 0.03750 0.02889 0.00677 0.00199 0.00733 0.00638 0.00415 0.00816 +2 0.01350 0.43535 0.29835 0.01242 0.01837 0.01800 0.01399 0.01715 0.01212 0.01581 0.01150 0.08730 0.01066 0.00659 0.00484 0.00160 0.00693 0.00495 0.00281 0.00774 +3 0.01232 0.04691 0.46276 0.01405 0.02036 0.01243 0.01621 0.01927 0.11757 0.05457 0.01860 0.08858 0.05901 0.00802 0.00595 0.00195 0.00699 0.02250 0.00376 0.00819 +4 0.01581 0.79572 0.03099 0.01012 0.01518 0.02340 0.01012 0.01771 0.01202 0.01391 0.00822 0.00949 0.00759 0.00506 0.00379 0.00126 0.00632 0.00316 0.00253 0.00759 +5 0.01449 0.01334 0.02057 0.15591 0.48183 0.04885 0.01593 0.04471 0.01386 0.04296 0.01332 0.06776 0.01176 0.00668 0.00601 0.00185 0.00698 0.02139 0.00337 0.00844 +6 0.00961 0.00801 0.01154 0.15249 0.03484 0.00842 0.04172 0.01293 0.05812 0.01710 0.04600 0.20057 0.16220 0.01270 0.00721 0.00220 0.02250 0.14725 0.03867 0.00591 +7 0.00810 0.00603 0.00753 0.00716 0.00867 0.00547 0.00537 0.01064 0.01611 0.02221 0.61793 0.04664 0.19096 0.01265 0.00698 0.00189 0.00283 0.01104 0.00631 0.00547 +8 0.01226 0.10705 0.68852 0.01618 0.02455 0.01470 0.02068 0.01863 0.01244 0.01825 0.01037 0.01219 0.00750 0.00556 0.00544 0.00181 0.00850 0.00425 0.00250 0.00862 +9 0.01574 0.01091 0.01374 0.01163 0.07766 0.00891 0.00844 0.04089 0.01382 0.17310 0.01333 0.01416 0.01007 0.00515 0.00488 0.00118 0.00481 0.00422 0.00432 0.56303 +10 0.05239 0.01350 0.01726 0.02017 0.28855 0.09039 0.01210 0.02170 0.03813 0.24141 0.03905 0.01658 0.01237 0.00618 0.00560 0.00166 0.00618 0.00525 0.00457 0.10696 +11 0.02167 0.02698 0.01655 0.01502 0.01807 0.71240 0.01135 0.05116 0.01708 0.01548 0.01011 0.01276 0.00864 0.00649 0.00545 0.00158 0.01032 0.02871 0.00324 0.00693 +12 0.01186 0.03059 0.76153 0.01686 0.02560 0.01373 0.02185 0.01873 0.01249 0.01873 0.01061 0.01249 0.00749 0.00562 0.00562 0.00187 0.00874 0.00437 0.00250 0.00874 +13 0.00857 0.00586 0.00709 0.00709 0.00731 0.00608 0.00438 0.00901 0.00879 0.01194 0.01805 0.03546 0.02009 0.63556 0.18478 0.00652 0.00785 0.00813 0.00350 0.00394 +14 0.00848 0.00623 0.00895 0.00895 0.00982 0.00709 0.00670 0.01021 0.00934 0.01332 0.01635 0.02604 0.01600 0.17986 0.63489 0.00882 0.01401 0.00675 0.00324 0.00497 +15 0.03991 0.43951 0.06160 0.01247 0.01744 0.10014 0.05930 0.12803 0.01530 0.06143 0.01047 0.01152 0.00843 0.00564 0.00470 0.00150 0.00706 0.00404 0.00344 0.00808 +16 0.70509 0.13495 0.01220 0.00815 0.01203 0.01486 0.00699 0.01743 0.01037 0.02455 0.00823 0.00959 0.00659 0.00542 0.00368 0.00174 0.00485 0.00320 0.00348 0.00659 +17 0.01538 0.52007 0.24277 0.01211 0.01821 0.01960 0.01344 0.01875 0.01248 0.06526 0.00993 0.01107 0.00803 0.00537 0.00447 0.00148 0.00694 0.00370 0.00284 0.00809 +18 0.01569 0.01697 0.06292 0.06089 0.47851 0.12492 0.09596 0.01923 0.01398 0.03836 0.01120 0.01428 0.00905 0.00546 0.00589 0.00177 0.00796 0.00521 0.00304 0.00871 +19 0.01523 0.74276 0.02937 0.00999 0.01474 0.02215 0.00981 0.01707 0.01197 0.01399 0.00985 0.06166 0.00970 0.00596 0.00405 0.00134 0.00613 0.00408 0.00273 0.00740 +20 0.01689 0.02031 0.02771 0.02107 0.02578 0.28989 0.44583 0.02049 0.01481 0.01715 0.01079 0.01392 0.00844 0.00557 0.00680 0.00184 0.03642 0.00576 0.00300 0.00752 + +[dist] +# distance from previous block +# <min> <max> +0 57 + +# created by: +# /home/cegg/simao/soft/augustus-3.2.1/scripts/msa2prfl.pl ./align_prep/EOG090W04UC.fa