Mercurial > repos > iuc > funannotate_sort
diff test-data/funannotate_db/Pfam-A.clans.tsv @ 1:4d3dbaf43243 draft
"planemo upload commit 87560553f1dbbd3e0ab7d7157fa5a7f32f61dca1"
author | iuc |
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date | Mon, 04 Oct 2021 19:36:51 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/funannotate_db/Pfam-A.clans.tsv Mon Oct 04 19:36:51 2021 +0000 @@ -0,0 +1,31 @@ +PF00001 CL0192 GPCR_A 7tm_1 7 transmembrane receptor (rhodopsin family) +PF00002 CL0192 GPCR_A 7tm_2 7 transmembrane receptor (Secretin family) +PF00003 CL0192 GPCR_A 7tm_3 7 transmembrane sweet-taste receptor of 3 GCPR +PF00004 CL0023 P-loop_NTPase AAA ATPase family associated with various cellular activities (AAA) +PF00005 CL0023 P-loop_NTPase ABC_tran ABC transporter +PF00006 CL0023 P-loop_NTPase ATP-synt_ab ATP synthase alpha/beta family, nucleotide-binding domain +PF00007 CL0079 Cystine-knot Cys_knot Cystine-knot domain +PF00008 CL0001 EGF EGF EGF-like domain +PF00009 CL0023 P-loop_NTPase GTP_EFTU Elongation factor Tu GTP binding domain +PF00010 HLH Helix-loop-helix DNA-binding domain +PF00011 CL0190 HSP20 HSP20 Hsp20/alpha crystallin family +PF00012 CL0108 Actin_ATPase HSP70 Hsp70 protein +PF00013 CL0007 KH KH_1 KH domain +PF00014 Kunitz_BPTI Kunitz/Bovine pancreatic trypsin inhibitor domain +PF00015 MCPsignal Methyl-accepting chemotaxis protein (MCP) signalling domain +PF00016 RuBisCO_large Ribulose bisphosphate carboxylase large chain, catalytic domain +PF00017 CL0541 SH2-like SH2 SH2 domain +PF00018 CL0010 SH3 SH3_1 SH3 domain +PF00019 CL0079 Cystine-knot TGF_beta Transforming growth factor beta like domain +PF00020 CL0607 TNF_receptor TNFR_c6 TNFR/NGFR cysteine-rich region +PF00021 CL0117 uPAR_Ly6_toxin UPAR_LY6 u-PAR/Ly-6 domain +PF00022 CL0108 Actin_ATPase Actin Actin +PF00023 CL0465 Ank Ank Ankyrin repeat +PF00024 CL0168 PAN PAN_1 PAN domain +PF00025 CL0023 P-loop_NTPase Arf ADP-ribosylation factor family +PF00026 CL0129 Peptidase_AA Asp Eukaryotic aspartyl protease +PF00027 CL0029 Cupin cNMP_binding Cyclic nucleotide-binding domain +PF00028 CL0159 E-set Cadherin Cadherin domain +PF00029 CL0375 Transporter Connexin Connexin +PF00030 CL0333 gCrystallin Crystall Beta/Gamma crystallin +PF00031 CL0121 Cystatin Cystatin Cystatin domain