Mercurial > repos > iuc > gemini_actionable_mutations

comparison gemini_actionable_mutations.xml @ 4:712aa8283200 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gemini commit 283362494058ed64143b1f27afb447b8a1cb4313
author iuc
date Fri, 14 Dec 2018 12:56:28 -0500
parents b6fb24500a86
children 643a9ad97f08
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3:3630a6e624d4 4:712aa8283200
1 <tool id="gemini_@BINARY@" name="GEMINI @BINARY@" version="@VERSION@.0"> 1 <tool id="gemini_@BINARY@" name="GEMINI @BINARY@" version="@VERSION@.1">
2 <description>Retrieve genes with actionable somatic mutations via COSMIC and DGIdb</description> 2 <description>Retrieve genes with actionable somatic mutations via COSMIC and DGIdb</description>
3 <macros> 3 <macros>
4 <import>gemini_macros.xml</import> 4 <import>gemini_macros.xml</import>
5 <token name="@BINARY@">actionable_mutations</token> 5 <token name="@BINARY@">actionable_mutations</token>
6 </macros> 6 </macros>
22 </outputs> 22 </outputs>
23 <tests> 23 <tests>
24 <test> 24 <test>
25 <!-- Like in set_somatic this example is nonsensical because otherwise 25 <!-- Like in set_somatic this example is nonsensical because otherwise
26 the testdata would be too big.--> 26 the testdata would be too big.-->
27 <param name="infile" value="gemini_comphets_input.db" ftype="gemini.sqlite" /> 27 <param name="infile" value="gemini_load_result1.db" ftype="gemini.sqlite" />
28 <output name="outfile" file="gemini_actionable_mutations_result.tabular" /> 28 <output name="outfile" file="gemini_actionable_mutations_result.tabular" />
29 </test> 29 </test>
30 </tests> 30 </tests>
31 <help><![CDATA[ 31 <help><![CDATA[
32 **What it does** 32 **What it does**