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comparison get_organelle_from_reads.xml @ 2:06bcf65179fb draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/getorganelle commit b7f743ebc67b5ffabac0eddf3b20960a6444365f
author iuc
date Thu, 23 Feb 2023 17:06:37 +0000
parents 8b330a577046
children 611219887a48
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1:8b330a577046 2:06bcf65179fb
1 <tool id="get_organelle_from_reads" name="Get organelle from reads" version="@TOOL_VERSION@"> 1 <tool id="get_organelle_from_reads" name="Get organelle from reads" version="@TOOL_VERSION@">
2 <macros> 2 <macros>
3 <token name="@TOOL_VERSION@">1.7.6.1</token> 3 <import>macros.xml</import>
4 <xml name="seed_and_genes" tokens="optional"> 4 <xml name="seed_and_genes" tokens="optional">
5 <param type="data" argument="-s" format="fasta" optional="@OPTIONAL@" label="Seed sequence(s)" help="Fasta file to use as initial seed. A seed sequence in GetOrganelle is only used for identifying initial organelle reads."/> 5 <param type="data" argument="-s" format="fasta" optional="@OPTIONAL@" label="Seed sequence(s)" help="Fasta file to use as initial seed. A seed sequence in GetOrganelle is only used for identifying initial organelle reads."/>
6 <param type="data" argument="--genes" format="fasta" optional="@OPTIONAL@" label="Gene sequence(s)" help="Fasta file containing protein coding genes and ribosomal RNAs extracted from a reference genome that you want to assemble."/> 6 <param type="data" argument="--genes" format="fasta" optional="@OPTIONAL@" label="Gene sequence(s)" help="Fasta file containing protein coding genes and ribosomal RNAs extracted from a reference genome that you want to assemble."/>
7 </xml> 7 </xml>
8 </macros> 8 </macros>