Mercurial > repos > iuc > gffcompare

comparison test-data/gffcompare_out1-1.tmap @ 3:2bb86e2c417f draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gffcompare commit c8a752199588db982182cbe7fffbcb8512313526
author iuc
date Mon, 27 May 2019 13:54:15 -0400
parents f99d7825a501
children
comparison
equal deleted inserted replaced
2:f99d7825a501 3:2bb86e2c417f
1 ref_gene_id ref_id class_code qry_gene_id qry_id num_exons FPKM TPM cov len major_iso_id ref_match_len 1 ref_gene_id ref_id class_code qry_gene_id qry_id num_exons FPKM TPM cov len major_iso_id ref_match_len
2 - - u CUFF.1 CUFF.1.1 1 20.607936 0.000000 1.317073 41 CUFF.1.1 - 2 - - u CUFF.1 CUFF.1.1 1 20.607936 0.000000 1.317073 9 CUFF.1.1 -
3 - - u CUFF.3 CUFF.3.1 1 27.255658 0.000000 1.741935 31 CUFF.3.1 - 3 - - u CUFF.3 CUFF.3.1 1 27.255658 0.000000 1.741935 6 CUFF.3.1 -
4 - - u CUFF.5 CUFF.5.1 1 31.293533 0.000000 2.000000 27 CUFF.5.1 - 4 - - u CUFF.5 CUFF.5.1 1 31.293533 0.000000 2.000000 9 CUFF.5.1 -
5 - - u CUFF.7 CUFF.7.1 1 9.999117 0.000000 0.639053 169 CUFF.7.1 - 5 - - u CUFF.7 CUFF.7.1 1 9.999117 0.000000 0.639053 9 CUFF.7.1 -
6 - - u CUFF.9 CUFF.9.1 1 17.776896 0.000000 1.136139 404 CUFF.9.1 - 6 - - u CUFF.9 CUFF.9.1 1 17.776896 0.000000 1.136139 9 CUFF.9.1 -
7 - - u CUFF.11 CUFF.11.1 1 31.293533 0.000000 2.000000 27 CUFF.11.1 - 7 - - u CUFF.10 CUFF.10.1 1 17.776896 0.000000 1.136139 9 CUFF.10.1 -
8 Xkr4 Xkr4 c CUFF.13 CUFF.13.1 1 10.695258 0.000000 0.683544 79 CUFF.13.1 3634
9 Xkr4 Xkr4 i CUFF.15 CUFF.15.1 1 10.695258 0.000000 0.683544 79 CUFF.15.1 3634
10 Xkr4 Xkr4 i CUFF.17 CUFF.17.1 1 8.710571 0.000000 0.556701 97 CUFF.17.1 3634
11 Xkr4 Xkr4 i CUFF.19 CUFF.19.1 1 29.337687 0.000000 1.875000 72 CUFF.19.1 3634
12 Xkr4 Xkr4 i CUFF.21 CUFF.21.1 1 13.851236 0.000000 0.885246 61 CUFF.21.1 3634
13 Xkr4 Xkr4 i CUFF.23 CUFF.23.1 1 23.470150 0.000000 1.500000 54 CUFF.23.1 3634
14 Xkr4 Xkr4 i CUFF.25 CUFF.25.1 1 14.567679 0.000000 0.931034 290 CUFF.25.1 3634
15 Xkr4 Xkr4 i CUFF.27 CUFF.27.1 1 34.253732 0.000000 2.189189 37 CUFF.27.1 3634
16 - - u CUFF.29 CUFF.29.1 1 107.103219 0.000000 6.845070 142 CUFF.29.1 -
17 - - u CUFF.31 CUFF.31.1 1 122.650461 0.000000 7.838710 31 CUFF.31.1 -
18 - - u CUFF.33 CUFF.33.1 1 109.527366 0.000000 7.000000 27 CUFF.33.1 -
19 - - u CUFF.35 CUFF.35.1 1 96.747183 0.000000 6.183206 131 CUFF.35.1 -
20 - - u CUFF.37 CUFF.37.1 1 104.085013 0.000000 6.652174 69 CUFF.37.1 -
21 - - u CUFF.39 CUFF.39.1 1 23.912983 0.000000 1.528302 53 CUFF.39.1 -
22 - - u CUFF.41 CUFF.41.1 1 10.695258 0.000000 0.683544 79 CUFF.41.1 -
23 - - u CUFF.43 CUFF.43.1 1 10.561567 0.000000 0.675000 80 CUFF.43.1 -
24 - - u CUFF.45 CUFF.45.1 1 20.708956 0.000000 1.323529 102 CUFF.45.1 -
25 - - u CUFF.47 CUFF.47.1 1 20.607936 0.000000 1.317073 41 CUFF.47.1 -
26 - - u CUFF.49 CUFF.49.1 1 15.646767 0.000000 1.000000 27 CUFF.49.1 -
27 - - u CUFF.51 CUFF.51.1 1 31.293533 0.000000 2.000000 27 CUFF.51.1 -
28 - - u CUFF.53 CUFF.53.1 1 31.293533 0.000000 2.000000 27 CUFF.53.1 -
29 - - u CUFF.55 CUFF.55.1 1 31.293533 0.000000 2.000000 27 CUFF.55.1 -
30 - - u CUFF.57 CUFF.57.1 1 15.646767 0.000000 1.000000 27 CUFF.57.1 -
31 - - u CUFF.59 CUFF.59.1 1 15.646767 0.000000 1.000000 27 CUFF.59.1 -
32 Xkr4 Xkr4 i CUFF.61 CUFF.61.1 1 45.263860 0.000000 2.892857 28 CUFF.61.1 3634
33 Xkr4 Xkr4 i CUFF.63 CUFF.63.1 1 15.646767 0.000000 1.000000 27 CUFF.63.1 3634
34 Xkr4 Xkr4 i CUFF.65 CUFF.65.1 1 15.362280 0.000000 0.981818 55 CUFF.65.1 3634
35 Xkr4 Xkr4 i CUFF.67 CUFF.67.1 1 12.998852 0.000000 0.830769 65 CUFF.67.1 3634
36 Xkr4 Xkr4 i CUFF.69 CUFF.69.1 1 10.058636 0.000000 0.642857 84 CUFF.69.1 3634
37 Xkr4 Xkr4 i CUFF.71 CUFF.71.1 1 8.621688 0.000000 0.551020 98 CUFF.71.1 3634
38 Xkr4 Xkr4 i CUFF.73 CUFF.73.1 1 15.362280 0.000000 0.981818 55 CUFF.73.1 3634
39 Xkr4 Xkr4 i CUFF.75 CUFF.75.1 1 31.293533 0.000000 2.000000 27 CUFF.75.1 3634
40 Xkr4 Xkr4 i CUFF.77 CUFF.77.1 1 16.248565 0.000000 1.038462 52 CUFF.77.1 3634
41 Xkr4 Xkr4 i CUFF.79 CUFF.79.1 1 31.293533 0.000000 2.000000 27 CUFF.79.1 3634
42 Xkr4 Xkr4 i CUFF.81 CUFF.81.1 1 13.201959 0.000000 0.843750 64 CUFF.81.1 3634
43 Xkr4 Xkr4 i CUFF.83 CUFF.83.1 1 13.201959 0.000000 0.843750 96 CUFF.83.1 3634
44 Xkr4 Xkr4 i CUFF.85 CUFF.85.1 1 31.293533 0.000000 2.000000 27 CUFF.85.1 3634
45 Xkr4 Xkr4 i CUFF.87 CUFF.87.1 1 17.243375 0.000000 1.102041 49 CUFF.87.1 3634
46 Xkr4 Xkr4 i CUFF.89 CUFF.89.1 1 16.567165 0.000000 1.058824 51 CUFF.89.1 3634
47 Xkr4 Xkr4 i CUFF.91 CUFF.91.1 1 31.293533 0.000000 2.000000 27 CUFF.91.1 3634
48 Xkr4 Xkr4 i CUFF.93 CUFF.93.1 1 21.664754 0.000000 1.384615 39 CUFF.93.1 3634
49 Xkr4 Xkr4 i CUFF.95 CUFF.95.1 1 46.940300 0.000000 3.000000 27 CUFF.95.1 3634
50 Xkr4 Xkr4 i CUFF.97 CUFF.97.1 1 21.481154 0.000000 1.372881 59 CUFF.97.1 3634
51 Xkr4 Xkr4 i CUFF.99 CUFF.99.1 1 14.567679 0.000000 0.931034 58 CUFF.99.1 3634