Mercurial > repos > iuc > gffcompare
diff test-data/gffcompare_out1.stats @ 0:3c97c841a443 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/gffcompare commit 33ef7ef2f829bf46a6fde7637715d974c17f898a
| author | iuc |
|---|---|
| date | Fri, 07 Apr 2017 16:02:07 -0400 |
| parents | |
| children | f99d7825a501 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/gffcompare_out1.stats Fri Apr 07 16:02:07 2017 -0400 @@ -0,0 +1,34 @@ +# gffcompare v0.9.8 | Command line was: +#gffcompare -r /tmp/tmp9HJ0Pt/files/000/dataset_364.dat -R -e 100 -d 100 /tmp/tmp9HJ0Pt/files/000/dataset_362.dat /tmp/tmp9HJ0Pt/files/000/dataset_363.dat +# + +#= Summary for dataset: /tmp/tmp9HJ0Pt/files/000/dataset_362.dat +# Query mRNAs : 50 in 50 loci (0 multi-exon transcripts) +# (0 multi-transcript loci, ~1.0 transcripts per locus) +# Reference mRNAs : 1 in 1 loci (1 multi-exon) +# Super-loci w/ reference transcripts: 1 +#-----------------| Sensitivity | Precision | + Base level: 2.2 | 2.3 | + Exon level: 0.0 | 0.0 | + Intron level: 0.0 | -nan | +Intron chain level: 0.0 | -nan | + Transcript level: 0.0 | 0.0 | + Locus level: 0.0 | 0.0 | + + Matching intron chains: 0 + Matching transcripts: 0 + Matching loci: 0 + + Missed exons: 2/3 ( 66.7%) + Novel exons: 49/50 ( 98.0%) + Missed introns: 2/2 (100.0%) + Missed loci: 0/1 ( 0.0%) + Novel loci: 49/50 ( 98.0%) + +#= Summary for dataset: /tmp/tmp9HJ0Pt/files/000/dataset_363.dat +# Query mRNAs : 50 in 50 loci (0 multi-exon transcripts) +# (0 multi-transcript loci, ~1.0 transcripts per locus) +# Reference mRNAs : 0 in 0 loci (0 multi-exon) + + Total union super-loci across all input datasets: 87 + (0 multi-transcript, ~1.1 transcripts per locus)