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diff test-data/gffcompare_out2.stats @ 0:3c97c841a443 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/gffcompare commit 33ef7ef2f829bf46a6fde7637715d974c17f898a
author iuc
date Fri, 07 Apr 2017 16:02:07 -0400
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children f99d7825a501
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/gffcompare_out2.stats	Fri Apr 07 16:02:07 2017 -0400
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+# gffcompare v0.9.8 | Command line was:
+#gffcompare -r /tmp/tmp6wAQh6/files/000/dataset_668.dat -R -e 100 -d 100 /tmp/tmp6wAQh6/files/000/dataset_667.dat
+#
+
+#= Summary for dataset: /tmp/tmp6wAQh6/files/000/dataset_667.dat 
+#     Query mRNAs :      35 in      29 loci  (15 multi-exon transcripts)
+#            (3 multi-transcript loci, ~1.2 transcripts per locus)
+# Reference mRNAs :      20 in       7 loci  (19 multi-exon)
+# Super-loci w/ reference transcripts:        6
+#-----------------| Sensitivity | Precision  |
+        Base level:    74.7     |    60.7    |
+        Exon level:    80.0     |    55.7    |
+      Intron level:    81.2     |    64.4    |
+Intron chain level:    10.5     |    13.3    |
+  Transcript level:    10.0     |     5.7    |
+       Locus level:    28.6     |     6.9    |
+
+     Matching intron chains:       2
+       Matching transcripts:       2
+              Matching loci:       2
+
+          Missed exons:       3/85	(  3.5%)
+           Novel exons:      46/122	( 37.7%)
+        Missed introns:      11/69	( 15.9%)
+         Novel introns:      28/87	( 32.2%)
+           Missed loci:       0/7	(  0.0%)
+            Novel loci:      15/29	( 51.7%)
+
+ Total union super-loci across all input datasets: 21