Mercurial > repos > iuc > gffcompare

diff test-data/gffcompare_out3.loci @ 5:f99dd58de04f draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gffcompare commit c8028c2640d2d213da5097df2341a8281fe0b7c8
author iuc
date Fri, 03 Feb 2023 10:57:30 +0000
parents 2bb86e2c417f
children
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line diff
--- a/test-data/gffcompare_out3.loci	Thu Oct 17 03:01:26 2019 -0400
+++ b/test-data/gffcompare_out3.loci	Fri Feb 03 10:57:30 2023 +0000
@@ -1,21 +1,29 @@
-XLOC_000001	chr1[+]160930303-160974977	uc007del.2|uc007del.2	MSTRG.4.1,MSTRG.5.1,MSTRG.6.1,MSTRG.3.1
-XLOC_000002	chr1[+]161003085-161003516	-	MSTRG.7.1
-XLOC_000003	chr1[+]161006151-161006466	-	MSTRG.10.1
-XLOC_000004	chr1[+]161008375-161008625	-	MSTRG.12.1
-XLOC_000005	chr1[+]161009768-161010195	-	MSTRG.13.1
-XLOC_000006	chr1[+]161019713-161019962	-	MSTRG.14.1
-XLOC_000007	chr1[+]161034351-161038539	uc007det.1|uc007det.1,uc007deu.1|uc007deu.1,uc007dev.1|uc007dev.1,uc007dew.1|uc007dew.1,uc011wun.1|uc011wun.1,uc007dex.1|uc007dex.1	MSTRG.16.1,MSTRG.16.2,MSTRG.16.3,MSTRG.16.4,MSTRG.16.5
-XLOC_000008	chr1[+]161041562-161070639	-	MSTRG.18.1,MSTRG.18.2
-XLOC_000009	chr1[+]161070945-161086329	uc007dfe.4|uc007dfe.4,uc007dfc.3|uc007dfc.3,uc007dfd.3|uc007dfd.3,uc056yep.1|uc056yep.1	MSTRG.20.1,MSTRG.21.1,MSTRG.22.1,MSTRG.23.1
-XLOC_000010	chr1[+]161088497-161088913	-	MSTRG.24.1
-XLOC_000011	chr1[+]161089415-161131512	-	MSTRG.26.1
-XLOC_000012	chr1[+]161123665-161123877	-	MSTRG.28.1
-XLOC_000013	chr1[-]29485012-29485458	-	MSTRG.1.1
-XLOC_000014	chr1[-]86909344-86909692	-	MSTRG.2.1
-XLOC_000015	chr1[-]161003658-161004769	-	MSTRG.8.1
-XLOC_000016	chr1[-]161005030-161005802	-	MSTRG.9.1
-XLOC_000017	chr1[-]161007444-161007700	-	MSTRG.11.1
-XLOC_000018	chr1[-]161019713-161034848	uc007der.1|uc007der.1,uc007des.1|uc007des.1	MSTRG.15.1
-XLOC_000019	chr1[-]161041525-161070649	uc007dey.2|uc007dey.2,uc007dez.2|uc007dez.2	MSTRG.17.1,MSTRG.19.1,MSTRG.19.2
-XLOC_000020	chr1[-]161088497-161131492	uc007dff.1|uc007dff.1,uc007dfg.1|uc007dfg.1,uc007dfh.1|uc007dfh.1,uc007dfi.1|uc007dfi.1	MSTRG.25.1,MSTRG.27.1
-XLOC_000021	chr1[-]192074156-192074378	-	MSTRG.29.1
+XLOC_000001	chr1[+]160930303-160940234	MSTRG.3|MSTRG.3.1	MSTRG.3.1
+XLOC_000002	chr1[+]160940817-160967997	MSTRG.4|MSTRG.4.1	MSTRG.4.1
+XLOC_000003	chr1[+]160968644-160972020	MSTRG.5|MSTRG.5.1	MSTRG.5.1
+XLOC_000004	chr1[+]160972938-160974977	MSTRG.6|MSTRG.6.1	MSTRG.6.1
+XLOC_000005	chr1[+]161003085-161003516	MSTRG.7|MSTRG.7.1	MSTRG.7.1
+XLOC_000006	chr1[+]161006151-161006466	MSTRG.10|MSTRG.10.1	MSTRG.10.1
+XLOC_000007	chr1[+]161008375-161008625	MSTRG.12|MSTRG.12.1	MSTRG.12.1
+XLOC_000008	chr1[+]161009768-161010195	MSTRG.13|MSTRG.13.1	MSTRG.13.1
+XLOC_000009	chr1[+]161019713-161019962	MSTRG.14|MSTRG.14.1	MSTRG.14.1
+XLOC_000010	chr1[+]161034351-161038539	MSTRG.16|MSTRG.16.1,MSTRG.16|MSTRG.16.2,MSTRG.16|MSTRG.16.3,MSTRG.16|MSTRG.16.4,MSTRG.16|MSTRG.16.5	MSTRG.16.1,MSTRG.16.2,MSTRG.16.3,MSTRG.16.4,MSTRG.16.5
+XLOC_000011	chr1[+]161041562-161070639	MSTRG.18|MSTRG.18.1,MSTRG.18|MSTRG.18.2	MSTRG.18.1,MSTRG.18.2
+XLOC_000012	chr1[+]161070945-161078458	MSTRG.20|MSTRG.20.1	MSTRG.20.1
+XLOC_000013	chr1[+]161082956-161083421	MSTRG.21|MSTRG.21.1	MSTRG.21.1
+XLOC_000014	chr1[+]161084121-161084344	MSTRG.22|MSTRG.22.1	MSTRG.22.1
+XLOC_000015	chr1[+]161085014-161086329	MSTRG.23|MSTRG.23.1	MSTRG.23.1
+XLOC_000016	chr1[+]161088497-161088913	MSTRG.24|MSTRG.24.1	MSTRG.24.1
+XLOC_000017	chr1[+]161089415-161131512	MSTRG.26|MSTRG.26.1	MSTRG.26.1
+XLOC_000018	chr1[+]161123665-161123877	MSTRG.28|MSTRG.28.1	MSTRG.28.1
+XLOC_000019	chr1[-]29485012-29485458	MSTRG.1|MSTRG.1.1	MSTRG.1.1
+XLOC_000020	chr1[-]86909344-86909692	MSTRG.2|MSTRG.2.1	MSTRG.2.1
+XLOC_000021	chr1[-]161003658-161004769	MSTRG.8|MSTRG.8.1	MSTRG.8.1
+XLOC_000022	chr1[-]161005030-161005802	MSTRG.9|MSTRG.9.1	MSTRG.9.1
+XLOC_000023	chr1[-]161007444-161007700	MSTRG.11|MSTRG.11.1	MSTRG.11.1
+XLOC_000024	chr1[-]161032044-161032396	MSTRG.15|MSTRG.15.1	MSTRG.15.1
+XLOC_000025	chr1[-]161041525-161050001	MSTRG.17|MSTRG.17.1	MSTRG.17.1
+XLOC_000026	chr1[-]161051330-161070649	MSTRG.19|MSTRG.19.1,MSTRG.19|MSTRG.19.2	MSTRG.19.1,MSTRG.19.2
+XLOC_000027	chr1[-]161088915-161090275	MSTRG.25|MSTRG.25.1	MSTRG.25.1
+XLOC_000028	chr1[-]161090412-161131492	MSTRG.27|MSTRG.27.1	MSTRG.27.1
+XLOC_000029	chr1[-]192074156-192074378	MSTRG.29|MSTRG.29.1	MSTRG.29.1