view test-data/gffcompare_in4.gtf @ 4:0f710191a66d draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gffcompare commit 851f81495c875ac09d936537ffd2b32e6af2c8c5"
author iuc
date Thu, 17 Oct 2019 03:01:26 -0400
parents 3c97c841a443
children
line wrap: on
line source

# stringtie --merge -p 1 -m 50 -c 0 -F 1.0 -T 1.0 -f 0.01 -g 250 -o /galaxy-repl/main/files/019/441/dataset_19441936.dat /galaxy-repl/main/files/018/604/dataset_18604623.dat /galaxy-repl/main/files/018/604/dataset_18604626.dat /galaxy-repl/main/files/018/604/dataset_18604628.dat /galaxy-repl/main/files/018/604/dataset_18604631.dat
# StringTie version 1.2.3
chr1	StringTie	transcript	29485012	29485458	1000	-	.	gene_id "MSTRG.1"; transcript_id "MSTRG.1.1";
chr1	StringTie	exon	29485012	29485458	1000	-	.	gene_id "MSTRG.1"; transcript_id "MSTRG.1.1"; exon_number "1";
chr1	StringTie	transcript	86909344	86909692	1000	-	.	gene_id "MSTRG.2"; transcript_id "MSTRG.2.1";
chr1	StringTie	exon	86909344	86909692	1000	-	.	gene_id "MSTRG.2"; transcript_id "MSTRG.2.1"; exon_number "1";
chr1	StringTie	transcript	160930303	160940234	1000	+	.	gene_id "MSTRG.3"; transcript_id "MSTRG.3.1";
chr1	StringTie	exon	160930303	160930344	1000	+	.	gene_id "MSTRG.3"; transcript_id "MSTRG.3.1"; exon_number "1";
chr1	StringTie	exon	160938112	160938232	1000	+	.	gene_id "MSTRG.3"; transcript_id "MSTRG.3.1"; exon_number "2";
chr1	StringTie	exon	160939995	160940234	1000	+	.	gene_id "MSTRG.3"; transcript_id "MSTRG.3.1"; exon_number "3";
chr1	StringTie	transcript	160940817	160967997	1000	+	.	gene_id "MSTRG.4"; transcript_id "MSTRG.4.1";
chr1	StringTie	exon	160940817	160940994	1000	+	.	gene_id "MSTRG.4"; transcript_id "MSTRG.4.1"; exon_number "1";
chr1	StringTie	exon	160942528	160942728	1000	+	.	gene_id "MSTRG.4"; transcript_id "MSTRG.4.1"; exon_number "2";
chr1	StringTie	exon	160946534	160946666	1000	+	.	gene_id "MSTRG.4"; transcript_id "MSTRG.4.1"; exon_number "3";
chr1	StringTie	exon	160948307	160948425	1000	+	.	gene_id "MSTRG.4"; transcript_id "MSTRG.4.1"; exon_number "4";
chr1	StringTie	exon	160950222	160950334	1000	+	.	gene_id "MSTRG.4"; transcript_id "MSTRG.4.1"; exon_number "5";
chr1	StringTie	exon	160950841	160951122	1000	+	.	gene_id "MSTRG.4"; transcript_id "MSTRG.4.1"; exon_number "6";
chr1	StringTie	exon	160951615	160951829	1000	+	.	gene_id "MSTRG.4"; transcript_id "MSTRG.4.1"; exon_number "7";
chr1	StringTie	exon	160954784	160955151	1000	+	.	gene_id "MSTRG.4"; transcript_id "MSTRG.4.1"; exon_number "8";
chr1	StringTie	exon	160955815	160955979	1000	+	.	gene_id "MSTRG.4"; transcript_id "MSTRG.4.1"; exon_number "9";
chr1	StringTie	exon	160959401	160959553	1000	+	.	gene_id "MSTRG.4"; transcript_id "MSTRG.4.1"; exon_number "10";
chr1	StringTie	exon	160962271	160962484	1000	+	.	gene_id "MSTRG.4"; transcript_id "MSTRG.4.1"; exon_number "11";
chr1	StringTie	exon	160963479	160963569	1000	+	.	gene_id "MSTRG.4"; transcript_id "MSTRG.4.1"; exon_number "12";
chr1	StringTie	exon	160963708	160963840	1000	+	.	gene_id "MSTRG.4"; transcript_id "MSTRG.4.1"; exon_number "13";
chr1	StringTie	exon	160964950	160965120	1000	+	.	gene_id "MSTRG.4"; transcript_id "MSTRG.4.1"; exon_number "14";
chr1	StringTie	exon	160965673	160965788	1000	+	.	gene_id "MSTRG.4"; transcript_id "MSTRG.4.1"; exon_number "15";
chr1	StringTie	exon	160967647	160967997	1000	+	.	gene_id "MSTRG.4"; transcript_id "MSTRG.4.1"; exon_number "16";
chr1	StringTie	transcript	160968644	160972020	1000	+	.	gene_id "MSTRG.5"; transcript_id "MSTRG.5.1";
chr1	StringTie	exon	160968644	160972020	1000	+	.	gene_id "MSTRG.5"; transcript_id "MSTRG.5.1"; exon_number "1";
chr1	StringTie	transcript	160972938	160974977	1000	+	.	gene_id "MSTRG.6"; transcript_id "MSTRG.6.1";
chr1	StringTie	exon	160972938	160974977	1000	+	.	gene_id "MSTRG.6"; transcript_id "MSTRG.6.1"; exon_number "1";
chr1	StringTie	transcript	161003085	161003516	1000	+	.	gene_id "MSTRG.7"; transcript_id "MSTRG.7.1";
chr1	StringTie	exon	161003085	161003516	1000	+	.	gene_id "MSTRG.7"; transcript_id "MSTRG.7.1"; exon_number "1";
chr1	StringTie	transcript	161003658	161004769	1000	-	.	gene_id "MSTRG.8"; transcript_id "MSTRG.8.1";
chr1	StringTie	exon	161003658	161004769	1000	-	.	gene_id "MSTRG.8"; transcript_id "MSTRG.8.1"; exon_number "1";
chr1	StringTie	transcript	161005030	161005802	1000	-	.	gene_id "MSTRG.9"; transcript_id "MSTRG.9.1";
chr1	StringTie	exon	161005030	161005802	1000	-	.	gene_id "MSTRG.9"; transcript_id "MSTRG.9.1"; exon_number "1";
chr1	StringTie	transcript	161006151	161006466	1000	+	.	gene_id "MSTRG.10"; transcript_id "MSTRG.10.1";
chr1	StringTie	exon	161006151	161006466	1000	+	.	gene_id "MSTRG.10"; transcript_id "MSTRG.10.1"; exon_number "1";
chr1	StringTie	transcript	161007444	161007700	1000	-	.	gene_id "MSTRG.11"; transcript_id "MSTRG.11.1";
chr1	StringTie	exon	161007444	161007700	1000	-	.	gene_id "MSTRG.11"; transcript_id "MSTRG.11.1"; exon_number "1";
chr1	StringTie	transcript	161008375	161008625	1000	+	.	gene_id "MSTRG.12"; transcript_id "MSTRG.12.1";
chr1	StringTie	exon	161008375	161008625	1000	+	.	gene_id "MSTRG.12"; transcript_id "MSTRG.12.1"; exon_number "1";
chr1	StringTie	transcript	161009768	161010195	1000	+	.	gene_id "MSTRG.13"; transcript_id "MSTRG.13.1";
chr1	StringTie	exon	161009768	161010195	1000	+	.	gene_id "MSTRG.13"; transcript_id "MSTRG.13.1"; exon_number "1";
chr1	StringTie	transcript	161019713	161019962	1000	+	.	gene_id "MSTRG.14"; transcript_id "MSTRG.14.1";
chr1	StringTie	exon	161019713	161019962	1000	+	.	gene_id "MSTRG.14"; transcript_id "MSTRG.14.1"; exon_number "1";
chr1	StringTie	transcript	161032044	161032396	1000	-	.	gene_id "MSTRG.15"; transcript_id "MSTRG.15.1";
chr1	StringTie	exon	161032044	161032396	1000	-	.	gene_id "MSTRG.15"; transcript_id "MSTRG.15.1"; exon_number "1";
chr1	StringTie	transcript	161034351	161038539	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.1";
chr1	StringTie	exon	161034351	161034719	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.1"; exon_number "1";
chr1	StringTie	exon	161035752	161035804	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.1"; exon_number "2";
chr1	StringTie	exon	161035983	161036014	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.1"; exon_number "3";
chr1	StringTie	exon	161036208	161036244	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.1"; exon_number "4";
chr1	StringTie	exon	161036549	161036579	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.1"; exon_number "5";
chr1	StringTie	exon	161036820	161036852	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.1"; exon_number "6";
chr1	StringTie	exon	161037288	161037315	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.1"; exon_number "7";
chr1	StringTie	exon	161037505	161037547	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.1"; exon_number "8";
chr1	StringTie	exon	161037995	161038037	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.1"; exon_number "9";
chr1	StringTie	exon	161038225	161038272	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.1"; exon_number "10";
chr1	StringTie	exon	161038457	161038539	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.1"; exon_number "11";
chr1	StringTie	transcript	161034584	161038539	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.2";
chr1	StringTie	exon	161034584	161034719	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.2"; exon_number "1";
chr1	StringTie	exon	161035752	161035804	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.2"; exon_number "2";
chr1	StringTie	exon	161035983	161036014	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.2"; exon_number "3";
chr1	StringTie	exon	161036208	161036244	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.2"; exon_number "4";
chr1	StringTie	exon	161036549	161036579	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.2"; exon_number "5";
chr1	StringTie	exon	161036820	161036852	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.2"; exon_number "6";
chr1	StringTie	exon	161037124	161037164	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.2"; exon_number "7";
chr1	StringTie	exon	161037288	161037315	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.2"; exon_number "8";
chr1	StringTie	exon	161037505	161037547	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.2"; exon_number "9";
chr1	StringTie	exon	161037995	161038037	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.2"; exon_number "10";
chr1	StringTie	exon	161038225	161038272	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.2"; exon_number "11";
chr1	StringTie	exon	161038457	161038539	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.2"; exon_number "12";
chr1	StringTie	transcript	161034642	161038338	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.3";
chr1	StringTie	exon	161034642	161035194	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.3"; exon_number "1";
chr1	StringTie	exon	161035752	161035804	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.3"; exon_number "2";
chr1	StringTie	exon	161035983	161036014	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.3"; exon_number "3";
chr1	StringTie	exon	161036208	161036244	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.3"; exon_number "4";
chr1	StringTie	exon	161036549	161036579	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.3"; exon_number "5";
chr1	StringTie	exon	161036820	161036852	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.3"; exon_number "6";
chr1	StringTie	exon	161037124	161037164	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.3"; exon_number "7";
chr1	StringTie	exon	161037288	161037315	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.3"; exon_number "8";
chr1	StringTie	exon	161037505	161037547	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.3"; exon_number "9";
chr1	StringTie	exon	161037995	161038037	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.3"; exon_number "10";
chr1	StringTie	exon	161038225	161038338	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.3"; exon_number "11";
chr1	StringTie	transcript	161035095	161038539	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.4";
chr1	StringTie	exon	161035095	161035194	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.4"; exon_number "1";
chr1	StringTie	exon	161035752	161035804	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.4"; exon_number "2";
chr1	StringTie	exon	161035983	161036014	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.4"; exon_number "3";
chr1	StringTie	exon	161036208	161036244	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.4"; exon_number "4";
chr1	StringTie	exon	161036549	161036579	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.4"; exon_number "5";
chr1	StringTie	exon	161036820	161036852	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.4"; exon_number "6";
chr1	StringTie	exon	161037288	161037315	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.4"; exon_number "7";
chr1	StringTie	exon	161037505	161037547	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.4"; exon_number "8";
chr1	StringTie	exon	161037995	161038037	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.4"; exon_number "9";
chr1	StringTie	exon	161038225	161038272	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.4"; exon_number "10";
chr1	StringTie	exon	161038457	161038539	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.4"; exon_number "11";
chr1	StringTie	transcript	161035164	161038539	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.5";
chr1	StringTie	exon	161035164	161035194	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.5"; exon_number "1";
chr1	StringTie	exon	161035752	161035804	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.5"; exon_number "2";
chr1	StringTie	exon	161035983	161036014	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.5"; exon_number "3";
chr1	StringTie	exon	161036208	161036579	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.5"; exon_number "4";
chr1	StringTie	exon	161036820	161036852	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.5"; exon_number "5";
chr1	StringTie	exon	161037124	161037164	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.5"; exon_number "6";
chr1	StringTie	exon	161037288	161037315	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.5"; exon_number "7";
chr1	StringTie	exon	161037505	161037547	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.5"; exon_number "8";
chr1	StringTie	exon	161037995	161038037	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.5"; exon_number "9";
chr1	StringTie	exon	161038225	161038272	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.5"; exon_number "10";
chr1	StringTie	exon	161038457	161038539	1000	+	.	gene_id "MSTRG.16"; transcript_id "MSTRG.16.5"; exon_number "11";
chr1	StringTie	transcript	161041525	161050001	1000	-	.	gene_id "MSTRG.17"; transcript_id "MSTRG.17.1";
chr1	StringTie	exon	161041525	161041930	1000	-	.	gene_id "MSTRG.17"; transcript_id "MSTRG.17.1"; exon_number "1";
chr1	StringTie	exon	161043613	161043688	1000	-	.	gene_id "MSTRG.17"; transcript_id "MSTRG.17.1"; exon_number "2";
chr1	StringTie	exon	161044959	161045069	1000	-	.	gene_id "MSTRG.17"; transcript_id "MSTRG.17.1"; exon_number "3";
chr1	StringTie	exon	161045258	161045476	1000	-	.	gene_id "MSTRG.17"; transcript_id "MSTRG.17.1"; exon_number "4";
chr1	StringTie	exon	161046777	161046929	1000	-	.	gene_id "MSTRG.17"; transcript_id "MSTRG.17.1"; exon_number "5";
chr1	StringTie	exon	161049938	161050001	1000	-	.	gene_id "MSTRG.17"; transcript_id "MSTRG.17.1"; exon_number "6";
chr1	StringTie	transcript	161041562	161070639	1000	+	.	gene_id "MSTRG.18"; transcript_id "MSTRG.18.1";
chr1	StringTie	exon	161041562	161041930	1000	+	.	gene_id "MSTRG.18"; transcript_id "MSTRG.18.1"; exon_number "1";
chr1	StringTie	exon	161043613	161043688	1000	+	.	gene_id "MSTRG.18"; transcript_id "MSTRG.18.1"; exon_number "2";
chr1	StringTie	exon	161044959	161045069	1000	+	.	gene_id "MSTRG.18"; transcript_id "MSTRG.18.1"; exon_number "3";
chr1	StringTie	exon	161045258	161045476	1000	+	.	gene_id "MSTRG.18"; transcript_id "MSTRG.18.1"; exon_number "4";
chr1	StringTie	exon	161046777	161046929	1000	+	.	gene_id "MSTRG.18"; transcript_id "MSTRG.18.1"; exon_number "5";
chr1	StringTie	exon	161049938	161050000	1000	+	.	gene_id "MSTRG.18"; transcript_id "MSTRG.18.1"; exon_number "6";
chr1	StringTie	exon	161051331	161051438	1000	+	.	gene_id "MSTRG.18"; transcript_id "MSTRG.18.1"; exon_number "7";
chr1	StringTie	exon	161056461	161056530	1000	+	.	gene_id "MSTRG.18"; transcript_id "MSTRG.18.1"; exon_number "8";
chr1	StringTie	exon	161057447	161057553	1000	+	.	gene_id "MSTRG.18"; transcript_id "MSTRG.18.1"; exon_number "9";
chr1	StringTie	exon	161060045	161060091	1000	+	.	gene_id "MSTRG.18"; transcript_id "MSTRG.18.1"; exon_number "10";
chr1	StringTie	exon	161060736	161060859	1000	+	.	gene_id "MSTRG.18"; transcript_id "MSTRG.18.1"; exon_number "11";
chr1	StringTie	exon	161062782	161062877	1000	+	.	gene_id "MSTRG.18"; transcript_id "MSTRG.18.1"; exon_number "12";
chr1	StringTie	exon	161063247	161063348	1000	+	.	gene_id "MSTRG.18"; transcript_id "MSTRG.18.1"; exon_number "13";
chr1	StringTie	exon	161065225	161065291	1000	+	.	gene_id "MSTRG.18"; transcript_id "MSTRG.18.1"; exon_number "14";
chr1	StringTie	exon	161069080	161069179	1000	+	.	gene_id "MSTRG.18"; transcript_id "MSTRG.18.1"; exon_number "15";
chr1	StringTie	exon	161069993	161070639	1000	+	.	gene_id "MSTRG.18"; transcript_id "MSTRG.18.1"; exon_number "16";
chr1	StringTie	transcript	161045151	161056533	1000	+	.	gene_id "MSTRG.18"; transcript_id "MSTRG.18.2";
chr1	StringTie	exon	161045151	161045476	1000	+	.	gene_id "MSTRG.18"; transcript_id "MSTRG.18.2"; exon_number "1";
chr1	StringTie	exon	161046777	161046929	1000	+	.	gene_id "MSTRG.18"; transcript_id "MSTRG.18.2"; exon_number "2";
chr1	StringTie	exon	161049938	161050000	1000	+	.	gene_id "MSTRG.18"; transcript_id "MSTRG.18.2"; exon_number "3";
chr1	StringTie	exon	161051331	161051438	1000	+	.	gene_id "MSTRG.18"; transcript_id "MSTRG.18.2"; exon_number "4";
chr1	StringTie	exon	161053941	161054120	1000	+	.	gene_id "MSTRG.18"; transcript_id "MSTRG.18.2"; exon_number "5";
chr1	StringTie	exon	161056461	161056533	1000	+	.	gene_id "MSTRG.18"; transcript_id "MSTRG.18.2"; exon_number "6";
chr1	StringTie	transcript	161051330	161070504	1000	-	.	gene_id "MSTRG.19"; transcript_id "MSTRG.19.1";
chr1	StringTie	exon	161051330	161051438	1000	-	.	gene_id "MSTRG.19"; transcript_id "MSTRG.19.1"; exon_number "1";
chr1	StringTie	exon	161053941	161054120	1000	-	.	gene_id "MSTRG.19"; transcript_id "MSTRG.19.1"; exon_number "2";
chr1	StringTie	exon	161056461	161056530	1000	-	.	gene_id "MSTRG.19"; transcript_id "MSTRG.19.1"; exon_number "3";
chr1	StringTie	exon	161057447	161057553	1000	-	.	gene_id "MSTRG.19"; transcript_id "MSTRG.19.1"; exon_number "4";
chr1	StringTie	exon	161060045	161060091	1000	-	.	gene_id "MSTRG.19"; transcript_id "MSTRG.19.1"; exon_number "5";
chr1	StringTie	exon	161060736	161060859	1000	-	.	gene_id "MSTRG.19"; transcript_id "MSTRG.19.1"; exon_number "6";
chr1	StringTie	exon	161062782	161062877	1000	-	.	gene_id "MSTRG.19"; transcript_id "MSTRG.19.1"; exon_number "7";
chr1	StringTie	exon	161063247	161063348	1000	-	.	gene_id "MSTRG.19"; transcript_id "MSTRG.19.1"; exon_number "8";
chr1	StringTie	exon	161065225	161065291	1000	-	.	gene_id "MSTRG.19"; transcript_id "MSTRG.19.1"; exon_number "9";
chr1	StringTie	exon	161069080	161069179	1000	-	.	gene_id "MSTRG.19"; transcript_id "MSTRG.19.1"; exon_number "10";
chr1	StringTie	exon	161069993	161070504	1000	-	.	gene_id "MSTRG.19"; transcript_id "MSTRG.19.1"; exon_number "11";
chr1	StringTie	transcript	161051331	161070649	1000	-	.	gene_id "MSTRG.19"; transcript_id "MSTRG.19.2";
chr1	StringTie	exon	161051331	161051438	1000	-	.	gene_id "MSTRG.19"; transcript_id "MSTRG.19.2"; exon_number "1";
chr1	StringTie	exon	161056461	161056530	1000	-	.	gene_id "MSTRG.19"; transcript_id "MSTRG.19.2"; exon_number "2";
chr1	StringTie	exon	161057447	161057553	1000	-	.	gene_id "MSTRG.19"; transcript_id "MSTRG.19.2"; exon_number "3";
chr1	StringTie	exon	161060045	161060091	1000	-	.	gene_id "MSTRG.19"; transcript_id "MSTRG.19.2"; exon_number "4";
chr1	StringTie	exon	161060736	161060859	1000	-	.	gene_id "MSTRG.19"; transcript_id "MSTRG.19.2"; exon_number "5";
chr1	StringTie	exon	161062782	161062877	1000	-	.	gene_id "MSTRG.19"; transcript_id "MSTRG.19.2"; exon_number "6";
chr1	StringTie	exon	161063247	161063348	1000	-	.	gene_id "MSTRG.19"; transcript_id "MSTRG.19.2"; exon_number "7";
chr1	StringTie	exon	161065225	161065291	1000	-	.	gene_id "MSTRG.19"; transcript_id "MSTRG.19.2"; exon_number "8";
chr1	StringTie	exon	161069080	161069179	1000	-	.	gene_id "MSTRG.19"; transcript_id "MSTRG.19.2"; exon_number "9";
chr1	StringTie	exon	161069993	161070649	1000	-	.	gene_id "MSTRG.19"; transcript_id "MSTRG.19.2"; exon_number "10";
chr1	StringTie	transcript	161070945	161078458	1000	+	.	gene_id "MSTRG.20"; transcript_id "MSTRG.20.1";
chr1	StringTie	exon	161070945	161071356	1000	+	.	gene_id "MSTRG.20"; transcript_id "MSTRG.20.1"; exon_number "1";
chr1	StringTie	exon	161074757	161074930	1000	+	.	gene_id "MSTRG.20"; transcript_id "MSTRG.20.1"; exon_number "2";
chr1	StringTie	exon	161078329	161078458	1000	+	.	gene_id "MSTRG.20"; transcript_id "MSTRG.20.1"; exon_number "3";
chr1	StringTie	transcript	161082956	161083421	1000	+	.	gene_id "MSTRG.21"; transcript_id "MSTRG.21.1";
chr1	StringTie	exon	161082956	161083421	1000	+	.	gene_id "MSTRG.21"; transcript_id "MSTRG.21.1"; exon_number "1";
chr1	StringTie	transcript	161084121	161084344	1000	+	.	gene_id "MSTRG.22"; transcript_id "MSTRG.22.1";
chr1	StringTie	exon	161084121	161084344	1000	+	.	gene_id "MSTRG.22"; transcript_id "MSTRG.22.1"; exon_number "1";
chr1	StringTie	transcript	161085014	161086329	1000	+	.	gene_id "MSTRG.23"; transcript_id "MSTRG.23.1";
chr1	StringTie	exon	161085014	161086329	1000	+	.	gene_id "MSTRG.23"; transcript_id "MSTRG.23.1"; exon_number "1";
chr1	StringTie	transcript	161088497	161088913	1000	+	.	gene_id "MSTRG.24"; transcript_id "MSTRG.24.1";
chr1	StringTie	exon	161088497	161088913	1000	+	.	gene_id "MSTRG.24"; transcript_id "MSTRG.24.1"; exon_number "1";
chr1	StringTie	transcript	161088915	161090275	1000	-	.	gene_id "MSTRG.25"; transcript_id "MSTRG.25.1";
chr1	StringTie	exon	161088915	161090275	1000	-	.	gene_id "MSTRG.25"; transcript_id "MSTRG.25.1"; exon_number "1";
chr1	StringTie	transcript	161089415	161131512	1000	+	.	gene_id "MSTRG.26"; transcript_id "MSTRG.26.1";
chr1	StringTie	exon	161089415	161090511	1000	+	.	gene_id "MSTRG.26"; transcript_id "MSTRG.26.1"; exon_number "1";
chr1	StringTie	exon	161093681	161093787	1000	+	.	gene_id "MSTRG.26"; transcript_id "MSTRG.26.1"; exon_number "2";
chr1	StringTie	exon	161095529	161095737	1000	+	.	gene_id "MSTRG.26"; transcript_id "MSTRG.26.1"; exon_number "3";
chr1	StringTie	exon	161098263	161098396	1000	+	.	gene_id "MSTRG.26"; transcript_id "MSTRG.26.1"; exon_number "4";
chr1	StringTie	exon	161099142	161099285	1000	+	.	gene_id "MSTRG.26"; transcript_id "MSTRG.26.1"; exon_number "5";
chr1	StringTie	exon	161101451	161101634	1000	+	.	gene_id "MSTRG.26"; transcript_id "MSTRG.26.1"; exon_number "6";
chr1	StringTie	exon	161102979	161103094	1000	+	.	gene_id "MSTRG.26"; transcript_id "MSTRG.26.1"; exon_number "7";
chr1	StringTie	exon	161105401	161105495	1000	+	.	gene_id "MSTRG.26"; transcript_id "MSTRG.26.1"; exon_number "8";
chr1	StringTie	exon	161106707	161106865	1000	+	.	gene_id "MSTRG.26"; transcript_id "MSTRG.26.1"; exon_number "9";
chr1	StringTie	exon	161109222	161109795	1000	+	.	gene_id "MSTRG.26"; transcript_id "MSTRG.26.1"; exon_number "10";
chr1	StringTie	exon	161130389	161130452	1000	+	.	gene_id "MSTRG.26"; transcript_id "MSTRG.26.1"; exon_number "11";
chr1	StringTie	exon	161131363	161131512	1000	+	.	gene_id "MSTRG.26"; transcript_id "MSTRG.26.1"; exon_number "12";
chr1	StringTie	transcript	161090412	161131492	1000	-	.	gene_id "MSTRG.27"; transcript_id "MSTRG.27.1";
chr1	StringTie	exon	161090412	161090511	1000	-	.	gene_id "MSTRG.27"; transcript_id "MSTRG.27.1"; exon_number "1";
chr1	StringTie	exon	161093681	161093787	1000	-	.	gene_id "MSTRG.27"; transcript_id "MSTRG.27.1"; exon_number "2";
chr1	StringTie	exon	161095529	161095737	1000	-	.	gene_id "MSTRG.27"; transcript_id "MSTRG.27.1"; exon_number "3";
chr1	StringTie	exon	161098263	161098396	1000	-	.	gene_id "MSTRG.27"; transcript_id "MSTRG.27.1"; exon_number "4";
chr1	StringTie	exon	161099142	161099285	1000	-	.	gene_id "MSTRG.27"; transcript_id "MSTRG.27.1"; exon_number "5";
chr1	StringTie	exon	161101451	161101634	1000	-	.	gene_id "MSTRG.27"; transcript_id "MSTRG.27.1"; exon_number "6";
chr1	StringTie	exon	161102979	161103094	1000	-	.	gene_id "MSTRG.27"; transcript_id "MSTRG.27.1"; exon_number "7";
chr1	StringTie	exon	161105401	161105495	1000	-	.	gene_id "MSTRG.27"; transcript_id "MSTRG.27.1"; exon_number "8";
chr1	StringTie	exon	161106707	161106865	1000	-	.	gene_id "MSTRG.27"; transcript_id "MSTRG.27.1"; exon_number "9";
chr1	StringTie	exon	161109222	161109795	1000	-	.	gene_id "MSTRG.27"; transcript_id "MSTRG.27.1"; exon_number "10";
chr1	StringTie	exon	161130389	161130452	1000	-	.	gene_id "MSTRG.27"; transcript_id "MSTRG.27.1"; exon_number "11";
chr1	StringTie	exon	161131363	161131492	1000	-	.	gene_id "MSTRG.27"; transcript_id "MSTRG.27.1"; exon_number "12";
chr1	StringTie	transcript	161123665	161123877	1000	+	.	gene_id "MSTRG.28"; transcript_id "MSTRG.28.1";
chr1	StringTie	exon	161123665	161123877	1000	+	.	gene_id "MSTRG.28"; transcript_id "MSTRG.28.1"; exon_number "1";
chr1	StringTie	transcript	192074156	192074378	1000	-	.	gene_id "MSTRG.29"; transcript_id "MSTRG.29.1";
chr1	StringTie	exon	192074156	192074378	1000	-	.	gene_id "MSTRG.29"; transcript_id "MSTRG.29.1"; exon_number "1";