view test-data/gffcompare_out2.gtf @ 4:0f710191a66d draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gffcompare commit 851f81495c875ac09d936537ffd2b32e6af2c8c5"
author iuc
date Thu, 17 Oct 2019 03:01:26 -0400
parents 2bb86e2c417f
children f99dd58de04f
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line source

chr1	Cufflinks	transcript	12	20	.	+	.	transcript_id "TCONS_00000006"; gene_id "XLOC_000001"; oId "CUFF.3.1"; class_code "u"; tss_id "TSS1";
chr1	Cufflinks	exon	12	20	.	+	.	transcript_id "TCONS_00000006"; gene_id "XLOC_000001"; exon_number "1";
chr1	Cufflinks	transcript	32	40	.	+	.	transcript_id "TCONS_00000001"; gene_id "XLOC_000002"; gene_name "Lypla1"; oId "CUFF.7.1"; cmp_ref "Lypla1"; class_code "c"; tss_id "TSS2";
chr1	Cufflinks	exon	32	40	.	+	.	transcript_id "TCONS_00000001"; gene_id "XLOC_000002"; exon_number "1";
chr1	Cufflinks	transcript	42	47	.	+	.	transcript_id "TCONS_00000007"; gene_id "XLOC_000002"; gene_name "Lypla1"; oId "CUFF.7.1"; contained_in "TCONS_00000002"; cmp_ref "Lypla1"; class_code "c"; tss_id "TSS3";
chr1	Cufflinks	exon	42	47	.	+	.	transcript_id "TCONS_00000007"; gene_id "XLOC_000002"; exon_number "1";
chr1	Cufflinks	transcript	42	50	.	+	.	transcript_id "TCONS_00000002"; gene_id "XLOC_000002"; gene_name "Lypla1"; oId "CUFF.9.1"; cmp_ref "Lypla1"; class_code "c"; tss_id "TSS3";
chr1	Cufflinks	exon	42	50	.	+	.	transcript_id "TCONS_00000002"; gene_id "XLOC_000002"; exon_number "1";
chr1	Cufflinks	transcript	52	60	.	+	.	transcript_id "TCONS_00000003"; gene_id "XLOC_000003"; gene_name "Lypla1"; oId "CUFF.10.1"; cmp_ref "Lypla1"; class_code "p"; tss_id "TSS4";
chr1	Cufflinks	exon	52	60	.	+	.	transcript_id "TCONS_00000003"; gene_id "XLOC_000003"; exon_number "1";
chr1	Cufflinks	transcript	2	10	.	-	.	transcript_id "TCONS_00000004"; gene_id "XLOC_000004"; oId "CUFF.1.1"; class_code "u"; tss_id "TSS5";
chr1	Cufflinks	exon	2	10	.	-	.	transcript_id "TCONS_00000004"; gene_id "XLOC_000004"; exon_number "1";
chr1	Cufflinks	transcript	15	20	.	-	.	transcript_id "TCONS_00000005"; gene_id "XLOC_000005"; oId "CUFF.3.1"; class_code "u"; tss_id "TSS6";
chr1	Cufflinks	exon	15	20	.	-	.	transcript_id "TCONS_00000005"; gene_id "XLOC_000005"; exon_number "1";
chr1	Cufflinks	transcript	22	30	.	-	.	transcript_id "TCONS_00000008"; gene_id "XLOC_000006"; oId "CUFF.5.1"; class_code "u"; tss_id "TSS7";
chr1	Cufflinks	exon	22	30	.	-	.	transcript_id "TCONS_00000008"; gene_id "XLOC_000006"; exon_number "1";