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comparison ggplot_point.xml @ 12:5fe1dc76176e draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ggplot2 commit 843a94f53c808d098def353b0bc5f7f554d9e1af
author iuc
date Fri, 09 Dec 2022 22:40:34 +0000
parents d0fc8b746d57
children 3b12bf9b4b87
comparison
equal deleted inserted replaced
11:d0fc8b746d57 12:5fe1dc76176e
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 <token name="@SIMPLE_GGLINE@">gg_line = geom_line(size=1, alpha=1, gg_factor)</token> 5 <token name="@SIMPLE_GGLINE@">gg_line = geom_line(size=1, alpha=1, gg_factor)</token>
6 </macros> 6 </macros>
7 <expand macro="requirements"> 7 <expand macro="requirements">
8 <requirement type="package" version="2.0.0">r-svglite</requirement> 8 <requirement type="package" version="2.1.0">r-svglite</requirement>
9 </expand> 9 </expand>
10 <command detect_errors="exit_code"><![CDATA[ 10 <command detect_errors="exit_code"><![CDATA[
11 cat '$script' && 11 cat '$script' &&
12 Rscript '$script' 12 Rscript '$script'
13 ]]></command> 13 ]]></command>
55 @SIMPLE_GGLINE@ 55 @SIMPLE_GGLINE@
56 #elif $adv.type_conditional.points.pointoptions == "default" 56 #elif $adv.type_conditional.points.pointoptions == "default"
57 gg_point = geom_point(size=1, alpha=1, gg_factor) 57 gg_point = geom_point(size=1, alpha=1, gg_factor)
58 @SIMPLE_GGLINE@ 58 @SIMPLE_GGLINE@
59 #else 59 #else
60 gg_point = geom_point(size=$adv.type_conditional.points.size, alpha=$adv.type_conditional.points.alpha, gg_factor) 60 gg_point = geom_point(size=$adv.type_conditional.points.size, alpha=$adv.type_conditional.points.alpha, gg_factor, shape=as.numeric('$adv.type_conditional.points.shape')
61 gg_line = geom_line(size=$adv.type_conditional.points.size, alpha=$adv.type_conditional.points.alpha, gg_factor) 61 gg_line = geom_line(size=$adv.type_conditional.points.size, alpha=$adv.type_conditional.points.alpha, gg_factor, shape=as.numeric('$adv.type_conditional.points.shape')
62 #end if 62 #end if
63 63
64 #if $adv.factor.colororder == 1 64 #if $adv.factor.colororder == 1
65 color_scale = scale_colour_hue(direction='$adv.factor.colororder') 65 color_scale = scale_colour_hue(direction='$adv.factor.colororder')
66 #else 66 #else