Mercurial > repos > iuc > gprofiler_convert

comparison test-data/example_snpense_results_2.txt @ 0:e219aca2f9fc draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gprofiler/ commit ed9b518a6aaf6a5aada47e39c039f6936e41b290"
author iuc
date Thu, 14 Nov 2019 05:59:47 -0500
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-1:000000000000 0:e219aca2f9fc
1 rs_id chromosome start end strand ensgs gene_names 3_prime_UTR_variant NMD_transcript_variant intron_variant missense_variant non_coding_transcript_exon_variant non_coding_transcript_variant splice_region_variant
2 rs7961894 12 121927677 121927677 + ENSG00000158023 WDR66 0 0 3 0 0 1 0
3 rs4305276 2 240555596 240555596 + ENSG00000144504 ANKMY1 0 0 57 0 0 18 0
4 rs17396340 1 10226118 10226118 + ENSG00000054523 KIF1B 0 0 8 0 0 0 0
5 rs944002 14 103106478 103106478 + ENSG00000205436 EXOC3L4 0 1 3 0 0 1 0
6 rs7694379 4 87265357 87265357 + ENSG00000250572 AC108516.1 0 0 1 0 0 1 0
7 rs3184504 12 111446804 111446804 + ENSG00000111252,ENSG00000204842 SH2B3,ATXN2 0 3 3 12 0 0 0
8 rs700585 5 88856300 88856300 + ENSG00000081189 MEF2C 0 0 44 0 0 6 0
9 rs7641175 3 18269920 18269920 + ENSG00000131374 TBC1D5 0 0 1 0 0 1 0
10 rs1260326 2 27508073 27508073 + ENSG00000084734 GCKR 0 0 0 2 1 0 3
11 rs342275 7 106718770 106718770 + ENSG00000243797 AC004917.1 0 0 2 0 0 2 0
12 rs2336384 1 11986006 11986006 + ENSG00000116688 MFN2 0 0 7 0 0 3 0
13 rs8022206 14 68054189 68054189 + ENSG00000182185 RAD51B 0 1 14 0 0 9 0
14 rs1354034 3 56815721 56815721 + ENSG00000163947 ARHGEF3 0 2 10 0 0 3 0
15 rs10761731 10 63267850 63267850 + ENSG00000171988 JMJD1C 0 0 6 0 0 4 0
16 rs11789898 9 134060541 134060541 + ENSG00000169925 BRD3 0 0 2 0 0 0 0
17 rs7075195 10 63290899 63290899 + ENSG00000171988 JMJD1C 0 0 2 0 0 1 0
18 rs2015599 12 29282547 29282547 + ENSG00000064763,ENSG00000257176 FAR2,AC009318.1 0 1 7 0 0 2 0
19 rs13300663 9 4814948 4814948 + ENSG00000120158 RCL1 0 0 8 0 0 2 0
20 rs11082304 18 23141009 23141009 + ENSG00000134508 CABLES1 0 2 16 0 0 6 0
21 rs10813766 9 331490 331490 + ENSG00000107099 DOCK8 0 2 9 0 0 3 0
22 rs4246215 11 61796827 61796827 + ENSG00000134824,ENSG00000168496 FADS2,FEN1 2 0 4 0 0 0 0
23 rs1668871 1 205268009 205268009 + ENSG00000133069 TMCC2 0 0 18 0 0 8 0
24 rs399604 6 33007237 33007237 + ENSG00000204252 HLA-DOA 0 0 2 0 1 1 0
25 rs10512627 3 124621375 124621375 + ENSG00000160145 KALRN 0 0 6 0 0 2 0
26 rs3731211 9 21986848 21986848 + ENSG00000147889,ENSG00000264545 CDKN2A,AL359922.1 0 1 6 0 0 0 0
27 rs2297067 14 103100448 103100448 + ENSG00000205436 EXOC3L4 0 0 0 2 0 0 0
28 rs8109288 19 16074749 16074749 + ENSG00000167460,ENSG00000279198 TPM4,AC008894.3 0 0 4 0 1 0 0
29 rs4148441 13 95245953 95245953 + ENSG00000125257 ABCC4 0 4 12 0 0 2 0
30 rs4521516 5 88804134 88804134 + ENSG00000081189 MEF2C 0 0 31 0 0 3 0
31 rs441460 6 25548060 25548060 + ENSG00000079691 CARMIL1 0 1 2 0 0 0 0
32 rs559972 17 29487478 29487478 + ENSG00000160551 TAOK1 0 0 3 0 0 1 0
33 rs6993770 8 105569300 105569300 + ENSG00000169946 ZFPM2 0 0 6 0 0 2 0
34 rs1719271 15 64891602 64891602 + ENSG00000249240 AC069368.1 0 0 2 0 0 1 0
35 rs7550918 1 247512257 247512257 + ENSG00000169224 GCSAML 0 0 6 0 0 0 0
36 rs6065 17 4933086 4933086 + ENSG00000185245 GP1BA 0 0 1 2 0 0 0
37 rs8006385 14 93034681 93034681 + ENSG00000100605 ITPK1 0 0 11 0 0 3 0
38 rs17030845 2 43460740 43460740 + ENSG00000115970 THADA 0 3 8 0 0 2 0
39 rs17356664 19 45237513 45237513 + ENSG00000007047,ENSG00000283632 MARK4,EXOC3L2 0 0 2 0 0 0 0
40 rs3819299 6 31354590 31354590 + ENSG00000234745 HLA-B 0 0 5 0 1 1 0
41 rs7317038 13 113358583 113358583 + ENSG00000139835,ENSG00000225083 GRTP1,GRTP1-AS1 0 0 4 0 0 1 0
42 rs10076782 5 159177955 159177955 + ENSG00000145860 RNF145 0 0 7 0 0 0 0
43 rs2070729 5 132484229 132484229 + ENSG00000125347,ENSG00000197536,ENSG00000283782 IRF1,C5orf56,AC116366.3 0 0 9 0 1 3 0
44 rs12969657 18 69869260 69869260 + ENSG00000150637 CD226 0 1 5 0 0 0 0
45 rs6995402 8 143931393 143931393 + ENSG00000178209 PLEC 0 0 10 0 0 0 0
46 rs625132 2 31259434 31259434 + ENSG00000013016 EHD3 0 0 1 0 0 0 0
47 rs16971217 17 35617036 35617036 + ENSG00000006125 AP2B1 0 1 11 0 0 1 0
48 rs649729 2 31241519 31241519 + ENSG00000013016 EHD3 0 0 2 0 0 0 0
49 rs8076739 17 29387569 29387569 + ENSG00000264808,ENSG00000266111 AC068025.1,AC068025.2 0 0 2 0 0 2 0
50 rs3811444 1 247876149 247876149 + ENSG00000162722 TRIM58 0 0 0 1 0 0 0
51 rs6141 3 184372478 184372478 + ENSG00000090534 THPO 12 0 0 0 0 0 0
52 rs10914144 1 171980610 171980610 + ENSG00000197959 DNM3 0 0 6 0 0 0 0
53 rs3000073 14 105263455 105263455 + ENSG00000185024 BRF1 0 0 8 0 0 0 0
54 rs9399137 6 135097880 135097880 + ENSG00000112339 HBS1L 0 0 1 0 0 0 0
55 rs210134 6 33572432 33572432 + ENSG00000204188 GGNBP1 0 0 1 0 0 1 0
56 rs3792366 3 123121029 123121029 + ENSG00000065485 PDIA5 0 2 4 0 0 0 0
57 rs4938642 11 119229196 119229196 + ENSG00000110395 CBL 0 0 5 0 0 0 0
58 rs2227831 5 76727669 76727669 + ENSG00000181104 F2R 0 0 1 0 0 0 0
59 rs1034566 22 19996754 19996754 + ENSG00000099889 ARVCF 0 0 4 0 0 2 0
60 rs941207 12 56629500 56629500 + ENSG00000076108 BAZ2A 0 0 7 0 0 2 0