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comparison test-data/intermediary_tree @ 0:8f62f666dcb6 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann2/ commit 6e73e77d186e02d200fc3a61d25311e67864a824
author iuc
date Sat, 04 Mar 2017 10:27:03 -0500
parents
children a490b70e46fc
comparison
equal deleted inserted replaced
-1:000000000000 0:8f62f666dcb6
1 <phyloxml xmlns="http://www.phyloxml.org" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.phyloxml.org http://www.phyloxml.org/1.10/phyloxml.xsd">
2 <phylogeny rooted="true">
3 <clade>
4 <clade>
5 <name>k__Archaea</name>
6 <branch_length>1.0</branch_length>
7 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">58.0748302504</property>
8 <clade>
9 <name>p__Euryarchaeota</name>
10 <branch_length>1.0</branch_length>
11 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">58.0748302504</property>
12 <clade>
13 <name>c__Methanobacteria</name>
14 <branch_length>1.0</branch_length>
15 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">58.0748302504</property>
16 <clade>
17 <name>o__Methanobacteriales</name>
18 <branch_length>1.0</branch_length>
19 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">58.0748302504</property>
20 <clade>
21 <name>f__Methanobacteriaceae</name>
22 <branch_length>1.0</branch_length>
23 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">58.0748302504</property>
24 <clade>
25 <name>g__Methanobrevibacter</name>
26 <branch_length>1.0</branch_length>
27 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">58.0748302504</property>
28 <clade>
29 <name>s__Methanobrevibacter_smithii</name>
30 <branch_length>1.0</branch_length>
31 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">58.0748302504</property>
32 <clade>
33 <name>t__Methanobrevibacter_smithii_unclassified</name>
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36 </clade>
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40 </clade>
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44 <clade>
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48 <clade>
49 <name>p__Deinococcus_Thermus</name>
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52 <clade>
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56 <clade>
57 <name>o__Deinococcales</name>
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60 <clade>
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68 <clade>
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77 <clade>
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93 <clade>
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97 <clade>
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101 <clade>
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109 <clade>
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133 <clade>
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138 <clade>
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142 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_color" ref="A:1">#2d19ff</property>
143 <clade>
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148 <clade>
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153 </clade>
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155 <clade>
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160 <clade>
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165 </clade>
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182 <clade>
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215 <clade>
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219 <clade>
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227 <clade>
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255 <clade>
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259 <clade>
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285 <clade>
286 <name>f__Moraxellaceae</name>
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289 <clade>
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293 <clade>
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313 <clade>
314 <name>s__Pseudomonas_unclassified</name>
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318 <clade>
319 <name>s__Pseudomonas_aeruginosa</name>
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322 <clade>
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336 <clade>
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348 <clade>
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378 <clade>
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382 <clade>
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396 <clade>
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400 <clade>
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404 <clade>
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408 <clade>
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414 <branch_length>1.0</branch_length>
415 <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.5761787104</property>
416 </clade>
417 </clade>
418 </clade>
419 </clade>
420 </clade>
421 </clade>
422 </clade>
423 </clade>
424 </clade>
425 <property applies_to="phylogeny" datatype="xsd:string" id_ref="class_legend_marker_size" ref="A:1">1.5</property>
426 <property applies_to="phylogeny" datatype="xsd:string" id_ref="class_legend_font_size" ref="A:1">10</property>
427 <property applies_to="phylogeny" datatype="xsd:string" id_ref="branch_bracket_depth" ref="A:1">0.8</property>
428 <property applies_to="phylogeny" datatype="xsd:string" id_ref="clade_separation" ref="A:1">0.5</property>
429 <property applies_to="phylogeny" datatype="xsd:string" id_ref="branch_bracket_width" ref="A:1">0.2</property>
430 <property applies_to="phylogeny" datatype="xsd:string" id_ref="annotation_legend_font_size" ref="A:1">10</property>
431 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_keys" ref="A:1">FIRMICUTES_._._PROTEOBACTERIA</property>
432 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_annotation_background_color" ref="A:1">._._._.</property>
433 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_annotation_background_edge_color" ref="A:1">._._._.</property>
434 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_clade_marker_color" ref="A:1">#2d19ff_._._#29cc36</property>
435 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_clade_marker_edge_width" ref="A:1">._._._.</property>
436 <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_clade_marker_size" ref="A:1">40_._._40</property>
437 <property applies_to="phylogeny" datatype="xsd:string" id_ref="ignore_branch_len" ref="A:1">1</property>
438 </phylogeny>
439 </phyloxml>