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view test-data/intermediary_tree @ 0:5d6f8f0bef7c draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann2/ commit 6e73e77d186e02d200fc3a61d25311e67864a824
author iuc
date Sat, 04 Mar 2017 10:27:20 -0500
parents
children cf1df6b2220a
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<phyloxml xmlns="http://www.phyloxml.org" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.phyloxml.org http://www.phyloxml.org/1.10/phyloxml.xsd">
  <phylogeny rooted="true">
    <clade>
      <clade>
        <name>k__Archaea</name>
        <branch_length>1.0</branch_length>
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        <clade>
          <name>p__Euryarchaeota</name>
          <branch_length>1.0</branch_length>
          <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">58.0748302504</property>
          <clade>
            <name>c__Methanobacteria</name>
            <branch_length>1.0</branch_length>
            <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">58.0748302504</property>
            <clade>
              <name>o__Methanobacteriales</name>
              <branch_length>1.0</branch_length>
              <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">58.0748302504</property>
              <clade>
                <name>f__Methanobacteriaceae</name>
                <branch_length>1.0</branch_length>
                <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">58.0748302504</property>
                <clade>
                  <name>g__Methanobrevibacter</name>
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                  <clade>
                    <name>s__Methanobrevibacter_smithii</name>
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                    <clade>
                      <name>t__Methanobrevibacter_smithii_unclassified</name>
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                      <property applies_to="clade" datatype="xsd:string" id_ref="clade_marker_size" ref="A:1">20.5761787104</property>
                    </clade>
                  </clade>
                </clade>
              </clade>
            </clade>
          </clade>
        </clade>
      </clade>
    </clade>
    <property applies_to="phylogeny" datatype="xsd:string" id_ref="class_legend_marker_size" ref="A:1">1.5</property>
    <property applies_to="phylogeny" datatype="xsd:string" id_ref="class_legend_font_size" ref="A:1">10</property>
    <property applies_to="phylogeny" datatype="xsd:string" id_ref="branch_bracket_depth" ref="A:1">0.8</property>
    <property applies_to="phylogeny" datatype="xsd:string" id_ref="clade_separation" ref="A:1">0.5</property>
    <property applies_to="phylogeny" datatype="xsd:string" id_ref="branch_bracket_width" ref="A:1">0.2</property>
    <property applies_to="phylogeny" datatype="xsd:string" id_ref="annotation_legend_font_size" ref="A:1">10</property>
    <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_keys" ref="A:1">FIRMICUTES_._._PROTEOBACTERIA</property>
    <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_annotation_background_color" ref="A:1">._._._.</property>
    <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_annotation_background_edge_color" ref="A:1">._._._.</property>
    <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_clade_marker_color" ref="A:1">#2d19ff_._._#29cc36</property>
    <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_clade_marker_edge_width" ref="A:1">._._._.</property>
    <property applies_to="phylogeny" datatype="xsd:string" id_ref="leg_clade_marker_size" ref="A:1">40_._._40</property>
    <property applies_to="phylogeny" datatype="xsd:string" id_ref="ignore_branch_len" ref="A:1">1</property>
  </phylogeny>
</phyloxml>