Mercurial > repos > iuc > hamronize_tool

comparison macros.xml @ 4:cbfa52c8f1ef draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hamronization commit b49fc153425676a82e77dec090676403112bcbe6
author iuc
date Tue, 05 Mar 2024 19:47:12 +0000
parents e13b801516dd
children
comparison
equal deleted inserted replaced
3:e13b801516dd 4:cbfa52c8f1ef
1 <macros> 1 <macros>
2 <token name="@TOOL_VERSION@">1.0.3</token> 2 <token name="@TOOL_VERSION@">1.1.4</token>
3 <token name="@PROFILE@">20.05</token> 3 <token name="@PROFILE@">23.1</token>
4 <xml name="bio_tools"> 4 <xml name="bio_tools">
5 <xrefs> 5 <xrefs>
6 <xref type="bio.tools">hamronization</xref> 6 <xref type="bio.tools">hamronization</xref>
7 </xrefs> 7 </xrefs>
8 </xml> 8 </xml>
9 <xml name="requirements"> 9 <xml name="requirements">
10 <requirements> 10 <requirements>
11 <requirement type="package" version="@TOOL_VERSION@">hamronization</requirement> 11 <requirement type="package" version="@TOOL_VERSION@">hamronization</requirement>
12 </requirements> 12 </requirements>
13 </xml> 13 </xml>
14 <xml name="version_command">
15 <version_command>hamronize --version</version_command>
16 </xml>
17 <xml name="report" token_format="tabular" token_label="Report" >
18 <param argument="report" type="data" format="@FORMAT@" label="@LABEL@"/>
19 </xml>
14 <xml name="input_file_name"> 20 <xml name="input_file_name">
15 <param name="input_file_name" type="text" label="Input file name" help="Sample name which was scanned with the tool"></param> 21 <param argument="--input_file_name" type="text" label="Sample name" help="If not provided, the input dataset will be taken"/>
16 </xml> 22 </xml>
17 <xml name="reference_database_id"> 23 <xml name="analysis_software_version" token_software="">
18 <param name="reference_database_id" type="text" label="Reference database ID" help="String containing the reference_database_id of this tool"></param> 24 <param argument="--analysis_software_version" type="text" label="@SOFTWARE@ version"/>
19 </xml> 25 </xml>
20 <xml name="reference_database_version"> 26 <xml name="reference_database_version">
21 <param name="reference_database_version" type="text" label="Reference database version"></param> 27 <param name="reference_database_version" type="text" label="Reference database version"/>
22 </xml> 28 </xml>
23 <xml name="analysis_software_version"> 29 <xml name="origin" token_software="">
24 <param name="analysis_software_version" type="text" label="Analysis software version"></param> 30 <conditional name="origin">
31 <param name="origin" type="select" label="Input generated within Galaxy on this server without leaving it?">
32 <option value="true" selected="true">Yes</option>
33 <option value="false">No</option>
34 </param>
35 <when value="true"/>
36 <when value="false">
37 <expand macro="analysis_software_version" software="@SOFTWARE@" />
38 </when>
39 </conditional>
40 <expand macro="reference_database_version"/>
25 </xml> 41 </xml>
26 <xml name="version_command"> 42 <xml name="reference_database_name" token_software="">
27 <version_command>hamronize --version</version_command> 43 <param name="reference_database_name" type="text" label="Reference database name for @SOFTWARE@"/>
28 </xml> 44 </xml>
29 <xml name="citations"> 45 <xml name="citations">
30 <citations> 46 <citations>
31 <citation type="doi">10.5281/zenodo.10015946</citation> 47 <citation type="doi">10.5281/zenodo.10015946</citation>
32 </citations> 48 </citations>