Mercurial > repos > iuc > hmmer3

comparison test-data/globins.pfamtblout @ 0:62479bdcc059 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 4164b44c651bcbdac6637eccce61b2a802c9b569
author iuc
date Tue, 12 May 2015 15:04:26 -0400
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-1:000000000000 0:62479bdcc059
1 # Sequence scores
2 # ---------------
3 #
4 # name bits E-value n exp bias description
5 # ------------------- ------ --------- --- ----- ----- ---------------------
6 sp|P02185|MYG_PHYCD 222.7 1.8e-70 1 1.0 3.2 Myoglobin OS=Physeter catodon GN=MB PE=1 SV=2
7 sp|P02024|HBB_GORGO 217.2 9.2e-69 1 1.0 0.1 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2
8
9 # Domain scores
10 # -------------
11 #
12 # name bits E-value hit bias env-st env-en ali-st ali-en hmm-st hmm-en description
13 # ------------------- ------ --------- ----- ----- ------ ------ ------ ------ ------ ------ ---------------------
14 sp|P02185|MYG_PHYCD 222.6 2e-70 1 3.2 1 148 2 148 2 149 Myoglobin OS=Physeter catodon GN=MB PE=1 SV=2
15 sp|P02024|HBB_GORGO 217.0 1e-68 1 0.1 2 147 2 147 1 149 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2
16 #
17 # Program: hmmsearch
18 # Version: 3.1b1 (May 2013)
19 # Pipeline mode: SEARCH
20 # Query file: test-data/globins4.hmm
21 # Target file: test-data/uniprot_matches.fasta
22 # Option settings: hmmsearch --tblout test-data/globins.tblout --domtblout test-data/globins.domtblout --pfamtblout test-data/globins.pfamtblout --notextw -E 10 --domE 10 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 2 test-data/globins4.hmm test-data/uniprot_matches.fasta
23 # Current dir: /home/users/cpt/cpt/esr/Projects/galaxy/tools-iuc/tools/hmmer
24 # Date: Mon Feb 9 14:36:36 2015
25 # [ok]