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view test-data/globins.domtblout @ 2:54b6b4d0613a draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 261c6a4ae771a24a27a23cd808a4ae6e5248939b
author iuc
date Thu, 01 Oct 2015 11:13:19 -0400
parents 62479bdcc059
children
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#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
sp|P02185|MYG_PHYCD  -            154 globins4             -            149   1.8e-70  222.7   3.2   1   1     2e-70     2e-70  222.6   3.2     2   149     2   148     1   148 0.99 Myoglobin OS=Physeter catodon GN=MB PE=1 SV=2
sp|P02024|HBB_GORGO  -            147 globins4             -            149   9.2e-69  217.2   0.1   1   1     1e-68     1e-68  217.0   0.1     1   149     2   147     2   147 0.99 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2
#
# Program:         hmmsearch
# Version:         3.1b1 (May 2013)
# Pipeline mode:   SEARCH
# Query file:      test-data/globins4.hmm
# Target file:     test-data/uniprot_matches.fasta
# Option settings: hmmsearch --tblout test-data/globins.tblout --domtblout test-data/globins.domtblout --pfamtblout test-data/globins.pfamtblout --notextw -E 10 --domE 10 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 2 test-data/globins4.hmm test-data/uniprot_matches.fasta 
# Current dir:     /home/users/cpt/cpt/esr/Projects/galaxy/tools-iuc/tools/hmmer
# Date:            Mon Feb  9 14:36:36 2015
# [ok]