Mercurial > repos > iuc > hmmer3
view test-data/globins.pfamtblout @ 2:54b6b4d0613a draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 261c6a4ae771a24a27a23cd808a4ae6e5248939b
| author | iuc |
|---|---|
| date | Thu, 01 Oct 2015 11:13:19 -0400 |
| parents | 62479bdcc059 |
| children |
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# Sequence scores # --------------- # # name bits E-value n exp bias description # ------------------- ------ --------- --- ----- ----- --------------------- sp|P02185|MYG_PHYCD 222.7 1.8e-70 1 1.0 3.2 Myoglobin OS=Physeter catodon GN=MB PE=1 SV=2 sp|P02024|HBB_GORGO 217.2 9.2e-69 1 1.0 0.1 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2 # Domain scores # ------------- # # name bits E-value hit bias env-st env-en ali-st ali-en hmm-st hmm-en description # ------------------- ------ --------- ----- ----- ------ ------ ------ ------ ------ ------ --------------------- sp|P02185|MYG_PHYCD 222.6 2e-70 1 3.2 1 148 2 148 2 149 Myoglobin OS=Physeter catodon GN=MB PE=1 SV=2 sp|P02024|HBB_GORGO 217.0 1e-68 1 0.1 2 147 2 147 1 149 Hemoglobin subunit beta OS=Gorilla gorilla gorilla GN=HBB PE=1 SV=2 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: test-data/globins4.hmm # Target file: test-data/uniprot_matches.fasta # Option settings: hmmsearch --tblout test-data/globins.tblout --domtblout test-data/globins.domtblout --pfamtblout test-data/globins.pfamtblout --notextw -E 10 --domE 10 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 2 test-data/globins4.hmm test-data/uniprot_matches.fasta # Current dir: /home/users/cpt/cpt/esr/Projects/galaxy/tools-iuc/tools/hmmer # Date: Mon Feb 9 14:36:36 2015 # [ok]