Mercurial > repos > iuc > hmmer_hmmalign
diff test-data/globins45.fa @ 0:17a98a843911 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 4261b86af790a3535c0b9a8122f92225f8f67b47
author | iuc |
---|---|
date | Sat, 25 Jun 2016 15:04:42 -0400 |
parents | |
children |
line wrap: on
line diff
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/globins45.fa Sat Jun 25 15:04:42 2016 -0400 @@ -0,0 +1,186 @@ +>MYG_ESCGI +VLSDAEWQLVLNIWAKVEADVAGHGQDILIRLFKGHPETLEKFDKFKHLK +TEAEMKASEDLKKHGNTVLTALGGILKKKGHHEAELKPLAQSHATKHKIP +IKYLEFISDAIIHVLHSRHPGDFGADAQAAMNKALELFRKDIAAKYKELG +FQG +>MYG_HORSE +GLSDGEWQQVLNVWGKVEADIAGHGQEVLIRLFTGHPETLEKFDKFKHLK +TEAEMKASEDLKKHGTVVLTALGGILKKKGHHEAELKPLAQSHATKHKIP +IKYLEFISDAIIHVLHSKHPGNFGADAQGAMTKALELFRNDIAAKYKELG +FQG +>MYG_PROGU +GLSDGEWQLVLNVWGKVEGDLSGHGQEVLIRLFKGHPETLEKFDKFKHLK +AEDEMRASEELKKHGTTVLTALGGILKKKGQHAAELAPLAQSHATKHKIP +VKYLEFISEAIIQVLQSKHPGDFGADAQGAMSKALELFRNDIAAKYKELG +FQG +>MYG_SAISC +GLSDGEWQLVLNIWGKVEADIPSHGQEVLISLFKGHPETLEKFDKFKHLK +SEDEMKASEELKKHGTTVLTALGGILKKKGQHEAELKPLAQSHATKHKIP +VKYLELISDAIVHVLQKKHPGDFGADAQGAMKKALELFRNDMAAKYKELG +FQG +>MYG_LYCPI +GLSDGEWQIVLNIWGKVETDLAGHGQEVLIRLFKNHPETLDKFDKFKHLK +TEDEMKGSEDLKKHGNTVLTALGGILKKKGHHEAELKPLAQSHATKHKIP +VKYLEFISDAIIQVLQNKHSGDFHADTEAAMKKALELFRNDIAAKYKELG +FQG +>MYG_MOUSE +GLSDGEWQLVLNVWGKVEADLAGHGQEVLIGLFKTHPETLDKFDKFKNLK +SEEDMKGSEDLKKHGCTVLTALGTILKKKGQHAAEIQPLAQSHATKHKIP +VKYLEFISEIIIEVLKKRHSGDFGADAQGAMSKALELFRNDIAAKYKELG +FQG +>MYG_MUSAN +VDWEKVNSVWSAVESDLTAIGQNILLRLFEQYPESQNHFPKFKNKSLGEL +KDTADIKAQADTVLSALGNIVKKKGSHSQPVKALAATHITTHKIPPHYFT +KITTIAVDVLSEMYPSEMNAQVQAAFSGAFKIICSDIEKEYKAANFQG +>HBA_AILME +VLSPADKTNVKATWDKIGGHAGEYGGEALERTFASFPTTKTYFPHFDLSP +GSAQVKAHGKKVADALTTAVGHLDDLPGALSALSDLHAHKLRVDPVNFKL +LSHCLLVTLASHHPAEFTPAVHASLDKFFSAVSTVLTSKYR +>HBA_PROLO +VLSPADKANIKATWDKIGGHAGEYGGEALERTFASFPTTKTYFPHFDLSP +GSAQVKAHGKKVADALTLAVGHLDDLPGALSALSDLHAYKLRVDPVNFKL +LSHCLLVTLACHHPAEFTPAVHASLDKFFTSVSTVLTSKYR +>HBA_PAGLA +VLSSADKNNIKATWDKIGSHAGEYGAEALERTFISFPTTKTYFPHFDLSH +GSAQVKAHGKKVADALTLAVGHLEDLPNALSALSDLHAYKLRVDPVNFKL +LSHCLLVTLACHHPAEFTPAVHSALDKFFSAVSTVLTSKYR +>HBA_MACFA +VLSPADKTNVKAAWGKVGGHAGEYGAEALERMFLSFPTTKTYFPHFDLSH +GSAQVKGHGKKVADALTLAVGHVDDMPQALSALSDLHAHKLRVDPVNFKL +LSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR +>HBA_MACSI +VLSPADKTNVKDAWGKVGGHAGEYGAEALERMFLSFPTTKTYFPHFDLSH +GSAQVKGHGKKVADALTLAVGHVDDMPQALSALSDLHAHKLRVDPVNFKL +LSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR +>HBA_PONPY +VLSPADKTNVKTAWGKVGAHAGDYGAEALERMFLSFPTTKTYFPHFDLSH +GSAQVKDHGKKVADALTNAVAHVDDMPNALSALSDLHAHKLRVDPVNFKL +LSHCLLVTLAAHLPAEFTPAVHASLDKFLASVSTVLTSKYR +>HBA2_GALCR +VLSPTDKSNVKAAWEKVGAHAGDYGAEALERMFLSFPTTKTYFPHFDLSH +GSTQVKGHGKKVADALTNAVLHVDDMPSALSALSDLHAHKLRVDPVNFKL +LRHCLLVTLACHHPAEFTPAVHASLDKFMASVSTVLTSKYR +>HBA_MESAU +VLSAKDKTNISEAWGKIGGHAGEYGAEALERMFFVYPTTKTYFPHFDVSH +GSAQVKGHGKKVADALTNAVGHLDDLPGALSALSDLHAHKLRVDPVNFKL +LSHCLLVTLANHHPADFTPAVHASLDKFFASVSTVLTSKYR +>HBA2_BOSMU +VLSAADKGNVKAAWGKVGGHAAEYGAEALERMFLSFPTTKTYFPHFDLSH +GSAQVKGHGAKVAAALTKAVGHLDDLPGALSELSDLHAHKLRVDPVNFKL +LSHSLLVTLASHLPSDFTPAVHASLDKFLANVSTVLTSKYR +>HBA_ERIEU +VLSATDKANVKTFWGKLGGHGGEYGGEALDRMFQAHPTTKTYFPHFDLNP +GSAQVKGHGKKVADALTTAVNNLDDVPGALSALSDLHAHKLRVDPVNFKL +LSHCLLVTLALHHPADFTPAVHASLDKFLATVATVLTSKYR +>HBA_FRAPO +VLSAADKNNVKGIFGKISSHAEDYGAEALERMFITYPSTKTYFPHFDLSH +GSAQVKGHGKKVVAALIEAANHIDDIAGTLSKLSDLHAHKLRVDPVNFKL +LGQCFLVVVAIHHPSALTPEVHASLDKFLCAVGNVLTAKYR +>HBA_PHACO +VLSAADKNNVKGIFTKIAGHAEEYGAEALERMFITYPSTKTYFPHFDLSH +GSAQIKGHGKKVVAALIEAVNHIDDITGTLSKLSDLHAHKLRVDPVNFKL +LGQCFLVVVAIHHPSALTPEVHASLDKFLCAVGTVLTAKYR +>HBA_TRIOC +VLSANDKTNVKTVFTKITGHAEDYGAETLERMFITYPPTKTYFPHFDLHH +GSAQIKAHGKKVVGALIEAVNHIDDIAGALSKLSDLHAQKLRVDPVNFKL +LGQCFLVVVAIHHPSVLTPEVHASLDKFLCAVGNVLSAKYR +>HBA_ANSSE +VLSAADKGNVKTVFGKIGGHAEEYGAETLQRMFQTFPQTKTYFPHFDLQP +GSAQIKAHGKKVAAALVEAANHIDDIAGALSKLSDLHAQKLRVDPVNFKF +LGHCFLVVLAIHHPSLLTPEVHASMDKFLCAVATVLTAKYR +>HBA_COLLI +VLSANDKSNVKAVFAKIGGQAGDLGGEALERLFITYPQTKTYFPHFDLSH +GSAQIKGHGKKVAEALVEAANHIDDIAGALSKLSDLHAQKLRVDPVNFKL +LGHCFLVVVAVHFPSLLTPEVHASLDKFVLAVGTVLTAKYR +>HBAD_CHLME +MLTADDKKLLTQLWEKVAGHQEEFGSEALQRMFLTYPQTKTYFPHFDLHP +GSEQVRGHGKKVAAALGNAVKSLDNLSQALSELSNLHAYNLRVDPANFKL +LAQCFQVVLATHLGKDYSPEMHAAFDKFLSAVAAVLAEKYR +>HBAD_PASMO +MLTAEDKKLIQQIWGKLGGAEEEIGADALWRMFHSYPSTKTYFPHFDLSQ +GSDQIRGHGKKVVAALSNAIKNLDNLSQALSELSNLHAYNLRVDPVNFKF +LSQCLQVSLATRLGKEYSPEVHSAVDKFMSAVASVLAEKYR +>HBAZ_HORSE +SLTKAERTMVVSIWGKISMQADAVGTEALQRLFSSYPQTKTYFPHFDLHE +GSPQLRAHGSKVAAAVGDAVKSIDNVAGALAKLSELHAYILRVDPVNFKF +LSHCLLVTLASRLPADFTADAHAAWDKFLSIVSSVLTEKYR +>HBA4_SALIR +SLSAKDKANVKAIWGKILPKSDEIGEQALSRMLVVYPQTKAYFSHWASVA +PGSAPVKKHGITIMNQIDDCVGHMDDLFGFLTKLSELHATKLRVDPTNFK +ILAHNLIVVIAAYFPAEFTPEIHLSVDKFLQQLALALAEKYR +>HBB_ORNAN +VHLSGGEKSAVTNLWGKVNINELGGEALGRLLVVYPWTQRFFEAFGDLSS +AGAVMGNPKVKAHGAKVLTSFGDALKNLDDLKGTFAKLSELHCDKLHVDP +ENFNRLGNVLIVVLARHFSKDFSPEVQAAWQKLVSGVAHALGHKYH +>HBB_TACAC +VHLSGSEKTAVTNLWGHVNVNELGGEALGRLLVVYPWTQRFFESFGDLSS +ADAVMGNAKVKAHGAKVLTSFGDALKNLDNLKGTFAKLSELHCDKLHVDP +ENFNRLGNVLVVVLARHFSKEFTPEAQAAWQKLVSGVSHALAHKYH +>HBE_PONPY +VHFTAEEKAAVTSLWSKMNVEEAGGEALGRLLVVYPWTQRFFDSFGNLSS +PSAILGNPKVKAHGKKVLTSFGDAIKNMDNLKTTFAKLSELHCDKLHVDP +ENFKLLGNVMVIILATHFGKEFTPEVQAAWQKLVSAVAIALAHKYH +>HBB_SPECI +VHLSDGEKNAISTAWGKVHAAEVGAEALGRLLVVYPWTQRFFDSFGDLSS +ASAVMGNAKVKAHGKKVIDSFSNGLKHLDNLKGTFASLSELHCDKLHVDP +ENFKLLGNMIVIVMAHHLGKDFTPEAQAAFQKVVAGVANALAHKYH +>HBB_SPETO +VHLTDGEKNAISTAWGKVNAAEIGAEALGRLLVVYPWTQRFFDSFGDLSS +ASAVMGNAKVKAHGKKVIDSFSNGLKHLDNLKGTFASLSELHCDKLHVDP +ENFKLLGNMIVIVMAHHLGKDFTPEAQAAFQKVVAGVANALSHKYH +>HBB_EQUHE +VQLSGEEKAAVLALWDKVNEEEVGGEALGRLLVVYPWTQRFFDSFGDLSN +PAAVMGNPKVKAHGKKVLHSFGEGVHHLDNLKGTFAQLSELHCDKLHVDP +ENFRLLGNVLVVVLARHFGKDFTPELQASYQKVVAGVANALAHKYH +>HBB_SUNMU +VHLSGEEKACVTGLWGKVNEDEVGAEALGRLLVVYPWTQRFFDSFGDLSS +ASAVMGNPKVKAHGKKVLHSLGEGVANLDNLKGTFAKLSELHCDKLHVDP +ENFRLLGNVLVVVLASKFGKEFTPPVQAAFQKVVAGVANALAHKYH +>HBB_CALAR +VHLTGEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLST +PDAVMNNPKVKAHGKKVLGAFSDGLTHLDNLKGTFAHLSELHCDKLHVDP +ENFRLLGNVLVCVLAHHFGKEFTPVVQAAYQKVVAGVANALAHKYH +>HBB_MANSP +VHLTPEEKTAVTTLWGKVNVDEVGGEALGRLLVVYPWTQRFFDSFGDLSS +PDAVMGNPKVKAHGKKVLGAFSDGLNHLDNLKGTFAQLSELHCDKLHVDP +ENFKLLGNVLVCVLAHHFGKEFTPQVQAAYQKVVAGVANALAHKYH +>HBB_URSMA +VHLTGEEKSLVTGLWGKVNVDEVGGEALGRLLVVYPWTQRFFDSFGDLSS +ADAIMNNPKVKAHGKKVLNSFSDGLKNLDNLKGTFAKLSELHCDKLHVDP +ENFKLLGNVLVCVLAHHFGKEFTPQVQAAYQKVVAGVANALAHKYH +>HBB_RABIT +VHLSSEEKSAVTALWGKVNVEEVGGEALGRLLVVYPWTQRFFESFGDLSS +ANAVMNNPKVKAHGKKVLAAFSEGLSHLDNLKGTFAKLSELHCDKLHVDP +ENFRLLGNVLVIVLSHHFGKEFTPQVQAAYQKVVAGVANALAHKYH +>HBB_TUPGL +VHLSGEEKAAVTGLWGKVDLEKVGGQSLGSLLIVYPWTQRFFDSFGDLSS +PSAVMSNPKVKAHGKKVLTSFSDGLNHLDNLKGTFAKLSELHCDKLHVDP +ENFRLLGNVLVRVLACNFGPEFTPQVQAAFQKVVAGVANALAHKYH +>HBB_TRIIN +VHLTPEEKALVIGLWAKVNVKEYGGEALGRLLVVYPWTQRFFEHFGDLSS +ASAIMNNPKVKAHGEKVFTSFGDGLKHLEDLKGAFAELSELHCDKLHVDP +ENFRLLGNVLVCVLARHFGKEFSPEAQAAYQKVVAGVANALAHKYH +>HBB_COLLI +VHWSAEEKQLITSIWGKVNVADCGAEALARLLIVYPWTQRFFSSFGNLSS +ATAISGNPNVKAHGKKVLTSFGDAVKNLDNIKGTFAQLSELHCDKLHVDP +ENFRLLGDILVIILAAHFGKDFTPECQAAWQKLVRVVAHALARKYH +>HBB_LARRI +VHWSAEEKQLITGLWGKVNVADCGAEALARLLIVYPWTQRFFASFGNLSS +PTAINGNPMVRAHGKKVLTSFGEAVKNLDNIKNTFAQLSELHCDKLHVDP +ENFRLLGDILIIVLAAHFAKDFTPDSQAAWQKLVRVVAHALARKYH +>HBB1_VAREX +VHWTAEEKQLICSLWGKIDVGLIGGETLAGLLVIYPWTQRQFSHFGNLSS +PTAIAGNPRVKAHGKKVLTSFGDAIKNLDNIKDTFAKLSELHCDKLHVDP +TNFKLLGNVLVIVLADHHGKEFTPAHHAAYQKLVNVVSHSLARRYH +>HBB2_XENTR +VHWTAEEKATIASVWGKVDIEQDGHDALSRLLVVYPWTQRYFSSFGNLSN +VSAVSGNVKVKAHGNKVLSAVGSAIQHLDDVKSHLKGLSKSHAEDLHVDP +ENFKRLADVLVIVLAAKLGSAFTPQVQAVWEKLNATLVAALSHGYF +>HBBL_RANCA +VHWTAEEKAVINSVWQKVDVEQDGHEALTRLFIVYPWTQRYFSTFGDLSS +PAAIAGNPKVHAHGKKILGAIDNAIHNLDDVKGTLHDLSEEHANELHVDP +ENFRRLGEVLIVVLGAKLGKAFSPQVQHVWEKFIAVLVDALSHSYH +>HBB2_TRICR +VHLTAEDRKEIAAILGKVNVDSLGGQCLARLIVVNPWSRRYFHDFGDLSS +CDAICRNPKVLAHGAKVMRSIVEATKHLDNLREYYADLSVTHSLKFYVDP +ENFKLFSGIVIVCLALTLQTDFSCHKQLAFEKLMKGVSHALGHGY