Mercurial > repos > iuc > hmmer_hmmalign
view test-data/MADE1.out.tblout @ 3:a9c62fc8187b draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit fa7dec5f222510d58f566f4799a04e3731fa03f6
author | iuc |
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date | Sat, 07 Apr 2018 03:48:42 -0400 |
parents | 17a98a843911 |
children | ca0b674e895b |
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# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- MADE1 DF0000629.2 humanchr1/239220001-239550000 - 7.1e-18 51.5 28.5 2e-12 34.0 0.7 9.6 5 0 0 5 5 5 2 MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon # # Program: hmmscan # Version: 3.1b1 (May 2013) # Pipeline mode: SCAN # Query file: test-data/dna_target.fa # Target file: test-data/MADE1.hmm # Option settings: hmmscan --tblout tblout --domtblout domtblout --pfamtblout pfamtblout test-data/MADE1.hmm test-data/dna_target.fa # Current dir: /home/users/cpt/cpt/esr/Projects/galaxy/tools-iuc/tools/hmmer # Date: Tue Feb 10 14:40:35 2015 # [ok]