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view test-data/MADE1.out.pfamtblout @ 5:750269125dc9 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hmmer3 commit 7d31599a80c15f11ed00b2b3cbfb77ed6dfc8f3d"
author iuc
date Tue, 16 Jun 2020 05:38:16 -0400
parents d0875d3f6544
children dc8860ba75d1
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# Sequence scores
# ---------------
#
# name                  bits   E-value   n   exp  bias    description
# ------------------- ------ --------- --- ----- -----    ---------------------
MADE1                   51.2   9.3e-18   4   8.6  26.3    MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon

# Domain scores
# -------------
#
#  name                 bits   E-value   hit  bias env-st env-en ali-st ali-en hmm-st hmm-en     description
# ------------------- ------ --------- ----- ----- ------ ------ ------ ------ ------ ------      ---------------------
MADE1                   34.8   1.3e-12     3   0.7 302387 302466 302388 302466      2     80     MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
MADE1                   27.4   2.4e-10     1   0.6 174456 174520 174456 174498      1     43     MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
MADE1                    1.4     0.033     4   0.4 304029 304108 304060 304106     27     74     MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
MADE1                   -8.4         1     2   5.8 197272 197342 197274 197341     12     79     MADE1 (MAriner Derived Element 1), a TcMar-Mariner DNA transposon
#
# Program:         hmmscan
# Version:         3.3 (Nov 2019)
# Pipeline mode:   SEARCH
# Query file:      /tmp/tmpqydies2m/files/5/d/3/dataset_5d34ccc7-9920-470e-9f13-678ab2ecd29d.dat
# Target file:     localref.hmm
# Option settings: hmmscan --tblout /tmp/tmpqydies2m/files/1/d/a/dataset_1da10e33-3e1c-48fc-abfb-7e3c263ec0df.dat --domtblout /tmp/tmpqydies2m/files/7/2/3/dataset_723f3cf1-e0de-4616-aec7-dd16680f3be3.dat --pfamtblout /tmp/tmpqydies2m/files/7/3/4/dataset_734c7f25-0a22-431b-9a7a-58849fcd6009.dat --notextw -E 10.0 --domE 10.0 --F1 0.02 --F2 0.001 --F3 1e-05 --seed 4 --cpu 1 localref.hmm /tmp/tmpqydies2m/files/5/d/3/dataset_5d34ccc7-9920-470e-9f13-678ab2ecd29d.dat 
# Current dir:     /tmp/tmpqydies2m/job_working_directory/000/8/working
# Date:            Thu May 14 18:53:22 2020
# [ok]